Pairwise Alignments
Query, 515 a.a., ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) / ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45
Subject, 503 a.a., sugar uptake ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021
Score = 395 bits (1015), Expect = e-114
Identities = 217/502 (43%), Positives = 329/502 (65%), Gaps = 7/502 (1%)
Query: 8 GNKASVAVEFDGVVKAFGPVQVLHGVSFALAPGRVYGLLGENGAGKSTLMKILAGYEQLT 67
G+ A ++ V K+FG V L G+ + GRV+ LLGENGAGKSTLMKILAG T
Sbjct: 3 GSAADTILKITDVTKSFGQVAALKGMRLEVRRGRVHTLLGENGAGKSTLMKILAGVHGAT 62
Query: 68 GGTLRINGQPQQFGSSRDAEALGIVLIHQEFNLAEDLSVAQNIFLGHEKKKGWLLDDAAM 127
G + ++GQ + + ++A +LG+ ++ QE +L +L+VA+NI E ++ ++D A+
Sbjct: 63 SGEIVLDGQAYRPANPQEAASLGLAIVFQELSLCNNLTVAENILATREPRRFGFINDKAL 122
Query: 128 EREAAAALSAVGLNIDPRTKVRKLIVAEKQLVEIAKAIARRARLLVMDEPTATLTPGETE 187
+A ++ + L ID KV L +A++QLVEIAK ++ A+++++DEPT++L+ E E
Sbjct: 123 VAKAHRIVADLRLPIDVTEKVGNLSIAQRQLVEIAKGLSHDAKVVILDEPTSSLSDSEAE 182
Query: 188 RLFKLIAQLRADGVTIVYISHKLDEVEQVTDEVIVMRDGRFVARAPTPEVTRQQMANLMV 247
LF++I +LR G I+YISH+++E+ +++D++ V+RDG +V+ EVT + + LMV
Sbjct: 183 ILFEIIGRLRQRGAAIIYISHRMEEIMRLSDDITVIRDGEYVSTHARDEVTIETLIALMV 242
Query: 248 GRELADLYPPRDVVVAAD-APAMRVRDFNVPGWAQDASFEVRPGEILGFAGLVGAGRTEL 306
GR + ++YPP VAAD AP + V G QD SF+VR GEILGF GLVG+GR+E+
Sbjct: 243 GRRMDEIYPPPVHHVAADRAPVLAVDRLTREGEFQDVSFDVRAGEILGFFGLVGSGRSEV 302
Query: 307 FEGLLGLRPASGNVEMLGKPVPGGKGWRNPRDAAKHGLTYLSEDRKGKGLHVNFGLRQNL 366
L G++ A+G V + G+ V +R+P A G+ +++E+RK +GL + + N+
Sbjct: 303 MNALFGMKSAAGTVRLDGEVV----RFRSPDQAIARGVGFVTENRKEEGLVLGHSVEWNI 358
Query: 367 TLMALERYA--QPWLRPEAERGALAGAVKEYGIRTGSLEVKASSLSGGNQQKLALAKVLQ 424
++ AL +A ++R AER A + V + I+T SLE A +LSGGNQQK+ LAK L
Sbjct: 359 SMAALADFAGGLGFIRNGAERAAASEQVGKLSIKTNSLETPAGALSGGNQQKIVLAKWLL 418
Query: 425 PRPKVVVLDEPTRGVDVGAKRDIYFLIQRLAREGLAVIVVSSELMELIGLCHRVAVMRAG 484
RPKV++LDEPTRGVDVGAK +IY +I+ LA EG A++++SS+L E++G+ RV VM G
Sbjct: 419 TRPKVLILDEPTRGVDVGAKFEIYKIIRELAAEGTAILLISSDLPEVLGMSDRVVVMHEG 478
Query: 485 RLVATLDADHLTEEELIAHATG 506
ATL+ LT E ++AHATG
Sbjct: 479 APGATLEGSALTPETIMAHATG 500