Pairwise Alignments
Query, 515 a.a., ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) / ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45
Subject, 526 a.a., sugar uptake ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021
Score = 392 bits (1006), Expect = e-113
Identities = 229/498 (45%), Positives = 309/498 (62%), Gaps = 21/498 (4%)
Query: 18 DGVVKAFGPVQVLHGVSFALAPGRVYGLLGENGAGKSTLMKILAGYEQLTGGTLRINGQP 77
+ + K+FG V L V F L G ++ L+GENGAGKSTLMK+L+G G +R++G+
Sbjct: 22 EAISKSFGGVAALKDVRFELRAGEIHALMGENGAGKSTLMKVLSGVYTDYEGAVRVDGET 81
Query: 78 QQFGSSRDAEALGIVLIHQEFNLAEDLSVAQNIFLGHEKKKGWLLDDAAMEREAAAAL-S 136
+F + RDAEA GI +IHQE NL +L VA NIFLG E+ L D EAA L +
Sbjct: 82 VRFSNVRDAEAAGIAIIHQELNLVPELGVADNIFLGRERVIAGLFVDRKASLEAARGLLN 141
Query: 137 AVGLNIDPRTKVRKLIVAEKQLVEIAKAIARRARLLVMDEPTATLTPGETERLFKLIAQL 196
+G+ +DP +V +L V E+QLVEIAKA++ AR+L+MDEPT+ L+PGE RLFK++ QL
Sbjct: 142 RLGIELDPEARVGQLRVGEQQLVEIAKALSVEARILIMDEPTSALSPGECRRLFKIMRQL 201
Query: 197 RADGVTIVYISHKLDEVEQVTDEVIVMRDGRFVARAPTPEVTRQQMANLMVGRELADLYP 256
ADGV I+YISH++DEV Q++D V V RDGR V P + + MVGR L D +
Sbjct: 202 AADGVGIIYISHRIDEVMQLSDRVTVFRDGRHVWARPMAGLDENTIIAAMVGRNLLDAH- 260
Query: 257 PRDVVVAADAPAMRVRDFNVP-----GW---AQDASFEVRPGEILGFAGLVGAGRTELFE 308
RD P + VRD ++ GW + SF+VR GEILG GL+GAGRTE+ E
Sbjct: 261 RRDRGKGGGEPVLSVRDLSLAVSGRHGWRDVLKGVSFDVRAGEILGIGGLLGAGRTEILE 320
Query: 309 GLL----GLRPASGNVEMLGKPVPGGKGWRNPRDAAKHGLTYLSEDRKGKGLHVNFGLRQ 364
+ GLR G + + G V R+PRDA + G ++EDRK KGLH++ +R
Sbjct: 321 TIFASNEGLR--GGEIRLDGIAV----NIRSPRDARRLGFALVTEDRKAKGLHLHESIRD 374
Query: 365 NLTLMALERYAQPWLRP-EAERGALAGAVKEYGIRTGSLEVKASSLSGGNQQKLALAKVL 423
N+ L + R A+ LR E ER GAV G+R A +LSGGNQQK+ + K L
Sbjct: 375 NVALPLVGRLARFGLRSFEGERALAKGAVDALGVRCAGTGQAAGTLSGGNQQKVVIGKWL 434
Query: 424 QPRPKVVVLDEPTRGVDVGAKRDIYFLIQRLAREGLAVIVVSSELMELIGLCHRVAVMRA 483
P+V++LDEPTRG+DVGAKR+IY LI +LA +GLA++VVSSEL EL+ L R+ VM
Sbjct: 435 ATGPRVLLLDEPTRGIDVGAKREIYDLIFKLAGDGLAIVVVSSELPELLLLADRILVMAE 494
Query: 484 GRLVATLDADHLTEEELI 501
GR + + +EE ++
Sbjct: 495 GRQTGLISREEASEERIM 512
Score = 87.4 bits (215), Expect = 1e-21
Identities = 72/261 (27%), Positives = 118/261 (45%), Gaps = 13/261 (4%)
Query: 251 LADLYPPRDVVVAADAPAMRV----RDFNVPGWAQDASFEVRPGEILGFAGLVGAGRTEL 306
+ D P V +D P + + F +D FE+R GEI G GAG++ L
Sbjct: 1 MRDAIPRDSVTTESDRPILAAEAISKSFGGVAALKDVRFELRAGEIHALMGENGAGKSTL 60
Query: 307 FEGLLGL-RPASGNVEMLGKPVPGGKGWRNPRDAAKHGLTYLSEDRKGKGLHVNFGLRQN 365
+ L G+ G V + G+ V + N RDA G+ + ++ L G+ N
Sbjct: 61 MKVLSGVYTDYEGAVRVDGETVR----FSNVRDAEAAGIAIIHQELN---LVPELGVADN 113
Query: 366 LTLMALERYAQPWLRPEAERGALAGAVKEYGIRTGSLEVKASSLSGGNQQKLALAKVLQP 425
+ L A ++ +A A G + GI E + L G QQ + +AK L
Sbjct: 114 IFLGRERVIAGLFVDRKASLEAARGLLNRLGIELDP-EARVGQLRVGEQQLVEIAKALSV 172
Query: 426 RPKVVVLDEPTRGVDVGAKRDIYFLIQRLAREGLAVIVVSSELMELIGLCHRVAVMRAGR 485
+++++DEPT + G R ++ ++++LA +G+ +I +S + E++ L RV V R GR
Sbjct: 173 EARILIMDEPTSALSPGECRRLFKIMRQLAADGVGIIYISHRIDEVMQLSDRVTVFRDGR 232
Query: 486 LVATLDADHLTEEELIAHATG 506
V L E +IA G
Sbjct: 233 HVWARPMAGLDENTIIAAMVG 253
Score = 87.4 bits (215), Expect = 1e-21
Identities = 70/231 (30%), Positives = 115/231 (49%), Gaps = 13/231 (5%)
Query: 29 VLHGVSFALAPGRVYGLLGENGAGKSTLMK-ILAGYEQLTGGTLRINGQPQQFGSSRDAE 87
VL GVSF + G + G+ G GAG++ +++ I A E L GG +R++G S RDA
Sbjct: 291 VLKGVSFDVRAGEILGIGGLLGAGRTEILETIFASNEGLRGGEIRLDGIAVNIRSPRDAR 350
Query: 88 ALGIVLIHQEFNLAEDLSVAQNI-------FLGHEKKKGWLLDDAAMEREAA-AALSAVG 139
LG L+ ++ A+ L + ++I +G + G L ER A A+ A+G
Sbjct: 351 RLGFALVTED-RKAKGLHLHESIRDNVALPLVGRLARFG--LRSFEGERALAKGAVDALG 407
Query: 140 LNIDPRTKVR-KLIVAEKQLVEIAKAIARRARLLVMDEPTATLTPGETERLFKLIAQLRA 198
+ + L +Q V I K +A R+L++DEPT + G ++ LI +L
Sbjct: 408 VRCAGTGQAAGTLSGGNQQKVVIGKWLATGPRVLLLDEPTRGIDVGAKREIYDLIFKLAG 467
Query: 199 DGVTIVYISHKLDEVEQVTDEVIVMRDGRFVARAPTPEVTRQQMANLMVGR 249
DG+ IV +S +L E+ + D ++VM +GR E + +++ L R
Sbjct: 468 DGLAIVVVSSELPELLLLADRILVMAEGRQTGLISREEASEERIMQLAAPR 518