Pairwise Alignments

Query, 400 a.a., FIG01198523: hypothetical protein from Variovorax sp. SCN45

Subject, 404 a.a., N-acetylglucosamine repressor from Vibrio cholerae E7946 ATCC 55056

 Score =  143 bits (361), Expect = 8e-39
 Identities = 108/381 (28%), Positives = 188/381 (49%), Gaps = 22/381 (5%)

Query: 25  SRHAMAEQLGFSKSKANALIAGLVEQGLLAEAGLQRSSGGRRAENLQLHFGLGVLVGIDI 84
           SR  +A+    + +    +   L+E+GL+ E   Q S+GGRRA +L         + + I
Sbjct: 31  SRIQVADVSQLAPASVTKITRQLLERGLIKEVAQQASTGGRRAISLTTEVKPFHSIAVRI 90

Query: 85  GATSLGVAV--LRPDLTVLTQHEEPADVRDGPAVLLARVRVLMRELLAQGGHTARDVLGI 142
           G   + +++  L  +  V   HE   + +D   VL++ +   +++ + Q       ++ I
Sbjct: 91  GRDYIQLSLYDLGGNSLVDEHHEFHYNTQD---VLMSSLIKQIKQFIQQHTALIDQLIAI 147

Query: 143 GIGVPGPVNFEIGQLVNPPLMPAWDSFSIRDYLREDYAAPVFVDNDVNLMALGE-LWRLK 201
           G+ +PG VN E G +   P + A +   +   +R+++    FV NDV  +AL E  +   
Sbjct: 148 GVALPGLVNPETGVVEYMPNV-AINELPLGATIRDEFHVECFVGNDVRGIALAEHYFGAS 206

Query: 202 RSLTNFLVIKIGTGIGCGIVCHGEVYRGAAGSAGDVGHICVDQEGPRCHCGNLGCVEAMA 261
           +   + +++ +  G G GI+ +G+V+ G   + G++GHI +D  G +C CGN GC+E +A
Sbjct: 207 QDCQDSILVSVHRGTGAGIIVNGQVFLGYNRNVGEIGHIQIDPLGEQCQCGNFGCLETVA 266

Query: 262 AGPAIT-RMAVQAAEAGESELLAECLRMHGRIDAI---DVGQASRGGDVAANGIIQRAGS 317
             PAIT R+    A+  ES L          +D I   DV + +  GD  A   + R G+
Sbjct: 267 TNPAITSRVQKLIAQGYESSL--------STLDTITIDDVCEHANAGDELAKQALVRVGN 318

Query: 318 LIGQMLASVVNFFNPSHVFIGGGITRIGPLFLAAVRQSVYQRSLALSTRHLEIQYTPLGM 377
            +G+ +A  VN FNP  + I G IT    +   A++++V  +SL    +HL I  + +  
Sbjct: 319 QLGKAIAITVNLFNPQKIVIAGQITAAKEIVFPAIQRNVENQSLKTFHQHLPIVSSQVYK 378

Query: 378 QGGLIGAGVLAMHETLKVRGV 398
           Q  +   G  AM +   + GV
Sbjct: 379 QPTM---GAFAMIKRAMLNGV 396