Pairwise Alignments

Query, 466 a.a., ATP synthase beta chain (EC 3.6.3.14) from Variovorax sp. SCN45

Subject, 439 a.a., flagellum-specific ATP synthase FliI from Vibrio cholerae E7946 ATCC 55056

 Score =  164 bits (415), Expect = 5e-45
 Identities = 123/395 (31%), Positives = 201/395 (50%), Gaps = 37/395 (9%)

Query: 1   MAEGKIVQCIGAVVDV---EFPRDQMPKVY--------DALKFEGSALTLEVQQQLGDGV 49
           MA GK+V+ +G  ++    + P   + KV         + + F G  L L   +Q+    
Sbjct: 21  MASGKLVRVVGLTLEATGCKAPVGSLCKVETMNGEMEAEVVGFSGDNLFLMPSEQI---- 76

Query: 50  VRTIALGSSDGLRRGLIVTNTGAPITVPVGKATLGRIMDVLGSPIDERGPVGQELTASIH 109
                +G   G +   I T +G    +PVG   LGR++D +G+P+D  GP+  +  AS++
Sbjct: 77  -----IGVLPGAKVTPITTESG----LPVGMELLGRVIDGVGNPLDGLGPIYTDQRASLN 127

Query: 110 RKAPAYDELSPSQDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAH 169
                     P  + L+ GIK I+ +    KG ++GLF G+GVGK+V +  +        
Sbjct: 128 AIPINPLARKPINEPLDVGIKAINGLLTVGKGQRIGLFAGSGVGKSVTLGMMTRGTT--- 184

Query: 170 SGLSVFAGVGERTREGNDFYHEMADSGVVNLEKLEDSKVAMVYGQMNEPPGNRLRVALTG 229
           + + V   +GER RE  +F  E     ++ ++  + S V  V    +  P  RL+   T 
Sbjct: 185 AQVVVVGLIGERGREVKEFIEE-----ILGVDGRQRSVV--VAAPADSSPLMRLKGCQTA 237

Query: 230 LTIAESFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERIT 289
           LTIAE FRD+G DVL  +D++ R+  A  E++  +G  P+  GY P++  ++  L ER  
Sbjct: 238 LTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAG 297

Query: 290 S--TKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTS 347
           +     GSIT+   V    DDL DP    + A LD  +VLSR++A  G YPA+D   S S
Sbjct: 298 NGGPHQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSREMADAGHYPAIDVEKSVS 357

Query: 348 RQLDPNVVGEEHYNVARAVQGTLQRYKELRDIIAI 382
           R + P +  +EH  +++AV+  L   ++ +D+++I
Sbjct: 358 RVM-PQITTDEHLLMSKAVRQILSVCRKNQDLVSI 391