Pairwise Alignments

Query, 537 a.a., ATP synthase alpha chain (EC 3.6.3.14) from Variovorax sp. SCN45

Subject, 439 a.a., flagellum-specific ATP synthase FliI from Vibrio cholerae E7946 ATCC 55056

 Score =  146 bits (368), Expect = 2e-39
 Identities = 97/350 (27%), Positives = 165/350 (47%), Gaps = 18/350 (5%)

Query: 102 VPVGPELIGRVVNALGQPIDGKGPINAKMTDVIEKVAPGVIARKSVDQPMQTGLKSVDSM 161
           +PVG EL+GRV++ +G P+DG GPI       +  +    +ARK +++P+  G+K+++ +
Sbjct: 94  LPVGMELLGRVIDGVGNPLDGLGPIYTDQRASLNAIPINPLARKPINEPLDVGIKAINGL 153

Query: 162 VPVGRGQRELIIGDRQTGKTAVAIDAIINQKGQNMTCVYVAIGQKASSIKNVVRALEQAG 221
           + VG+GQR  +      GK+      ++ +       V   IG++   +K  +  +    
Sbjct: 154 LTVGKGQRIGLFAGSGVGKSVTL--GMMTRGTTAQVVVVGLIGERGREVKEFIEEILGVD 211

Query: 222 AMDYTIVVAASASESAAMQYVSAYSGCTMGEYFRDRGQDALIVYDDLSKQAVAYRQVSLL 281
               ++VVAA A  S  M+     +  T+ EYFRD+G D L++ D L++ A A R+++L 
Sbjct: 212 GRQRSVVVAAPADSSPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALS 271

Query: 282 LRRPPGREAYPGDVFYLHSRLLERAARVNADYVEAFTKGEVKGKTGSLTALPIIETQAGD 341
           +  PP  + YP  VF     L+ERA             G      GS+TA   + T+  D
Sbjct: 272 VGEPPATKGYPPSVFAKLPALVERA-------------GNGGPHQGSITAFFTVLTEGDD 318

Query: 342 VSAFVPTNVISITDGQIFLETNLFNAGIRPAINAGISVSRVGSSAQTNLVKNQSGGIRTD 401
           +   +     +I DG I L   + +AG  PAI+   SVSRV     T+     S  +R  
Sbjct: 319 LQDPIADASRAILDGHIVLSREMADAGHYPAIDVEKSVSRVMPQITTDEHLLMSKAVRQI 378

Query: 402 LAQYR---ELAAFAQFASDLDEATRKQLDRGARVTELLKQTQYNPLPISL 448
           L+  R   +L +   +    D+A         ++ + L+Q     +P  +
Sbjct: 379 LSVCRKNQDLVSIGAYKPGTDKAIDAAFTLKPKLDQYLQQAMKETVPYDM 428