Pairwise Alignments

Query, 398 a.a., Outer membrane protein romA from Variovorax sp. SCN45

Subject, 362 a.a., Zn-dependent hydrolase of the beta-lactamase fold (RefSeq) from Shewanella loihica PV-4

 Score =  182 bits (462), Expect = 1e-50
 Identities = 111/338 (32%), Positives = 171/338 (50%), Gaps = 49/338 (14%)

Query: 34  HHRPDG-FQDNYVDFKPKNFFTDVLLGWQIPSWFKGLPPAPEAPPPVVAPDLAFIASNAG 92
           HHR DG FQ+   +    +    +L+ +   +     P       P+    +A +  +  
Sbjct: 30  HHRSDGGFQNTATNLTENSGMGAILMRYLTETRIDASPSKAIPLMPLTRDGIAALPDS-- 87

Query: 93  ARTQPAATFIGHATVLVQVPTANGGLNVLTDPVFGERVSPVSFAGPKRFQPPGVALKELP 152
              Q +   +GH+++L+++     G   L DPVF +R SP SF GPKRF  P +AL++LP
Sbjct: 88  ---QDSVIRLGHSSILLKI----AGQTWLIDPVFSDRASPFSFIGPKRFHQPPIALEQLP 140

Query: 153 HIDLVLISHNHYDHLDEDSVKALDAQAGGPPLFVVPLGIKPWLAARGITN--AVELDWWD 210
            ID VLISH+HYDHLDE+S+K L  +      F+VPLG++  L   G+ N     LDWW 
Sbjct: 141 EIDGVLISHDHYDHLDEESIKQLHHKV---KRFIVPLGVEQHLLRWGVANDKVQPLDWWQ 197

Query: 211 SVTLPAAPSAQPLVQRNGAGIAAGATGDAVQVFLTPAQHWSARGLGDRMKTLWGGFALLS 270
           SVTL                         + +  TP QH+S RGL D+ +TLW  + + S
Sbjct: 198 SVTL-----------------------GKLSITATPTQHFSGRGLWDKNQTLWASYVIQS 234

Query: 271 PKLHVFYSGDTGYSKDFADIQARLAPRQANAQGGGFDLALLPVGAYEPRWFMKDQHVNPD 330
            +  +++SGD+GY   F  I  R  P         FDL ++  GAY+  W     H+ P+
Sbjct: 235 DRSKLYFSGDSGYFDGFKAIGERFGP---------FDLTMIETGAYDKDW--PSIHMTPE 283

Query: 331 ESVRIHRELHAKRSLGVHWGTFSLTDEALDQPPKDLAA 368
           +S++ H +L  ++ + +H GTF L   +  +P + +AA
Sbjct: 284 QSLQAHLDLGGRQMMPIHNGTFDLAFHSWYEPLERIAA 321