Pairwise Alignments

Query, 398 a.a., Outer membrane protein romA from Variovorax sp. SCN45

Subject, 372 a.a., Conserved protein from Mycobacterium tuberculosis H37Rv

 Score =  180 bits (457), Expect = 5e-50
 Identities = 135/389 (34%), Positives = 187/389 (48%), Gaps = 64/389 (16%)

Query: 3   RLRHVAAALCAGGLL--AACSTPPNPYYDASR----RHHRPDGFQDNYVDFKPKNFFTDV 56
           RL    A+L AG  L  A   TP     DA+         P+     +V+  P + FT  
Sbjct: 7   RLAAGTASLAAGTWLLRALHGTPAALGADAASIRAVSEQSPNYRDGAFVNLDPASMFTLD 66

Query: 57  -----LLGWQIPSWFKGLPPAPEAPPPVVAPDLAFIASNAGARTQPAATFIGHATVLVQV 111
                L+ W++ +      PA  AP P+ +P++       G  ++ A ++ GH+T L+++
Sbjct: 67  REELRLIVWELVARHSASRPA--APIPLASPNIY-----RGDASRLAVSWFGHSTALLEI 119

Query: 112 PTANGGLNVLTDPVFGERVSPVSFAGPKRFQPPGVALKELPHIDLVLISHNHYDHLDEDS 171
                G  VLTDPV+ +R SP    GP+R  PP V L  LP +D V+ISH+HYDHLD D+
Sbjct: 120 D----GYRVLTDPVWSDRCSPSDVVGPQRLHPPPVQLAALPAVDAVVISHDHYDHLDIDT 175

Query: 172 VKALDAQAGGPPLFVVPLGIKPWLAARGI--TNAVELDWWDSVTLPAAPSAQPLVQRNGA 229
           V AL      P  F+VPLG+   L + G+     VELDW  S                  
Sbjct: 176 VVALVGMQRAP--FLVPLGVGAHLRSWGVPQDRIVELDWNQS------------------ 215

Query: 230 GIAAGATGDAVQVFLTPAQHWSARGLGDRMKTLWGGFALLSPKLHVFYSGDTGYSKDFAD 289
                A  D + V   PA+H+S R L  R  TLW  +A + P    ++ GDTGY+K F  
Sbjct: 216 -----AQVDELTVVCVPARHFSGRFL-SRNTTLWASWAFVGPNHRAYFGGDTGYTKSFT- 268

Query: 290 IQARLAPRQANAQGGGFDLALLPVGAYEPRWFMKDQHVNPDESVRIHRELHAKRS---LG 346
                   Q  A  G FDL LLP+GAY   W   D H+NP+E+VR H ++    S   + 
Sbjct: 269 --------QIGADHGPFDLTLLPIGAYNTAW--PDIHMNPEEAVRAHLDVTDSGSGMLVP 318

Query: 347 VHWGTFSLTDEALDQPPKDLAAARKAQGV 375
           VHWGTF L      +P + L AA + + V
Sbjct: 319 VHWGTFRLAPHPWGEPVERLLAAAEPEHV 347