Pairwise Alignments

Query, 486 a.a., Two-component system sensor histidine kinase from Variovorax sp. SCN45

Subject, 351 a.a., PAS domain-containing sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

 Score = 97.8 bits (242), Expect = 5e-25
 Identities = 77/233 (33%), Positives = 119/233 (51%), Gaps = 10/233 (4%)

Query: 257 THLRAAAQQRSRDQRLAALGRMTGGIAHEIRNPIATMRLKAENALAAAPERQGAALQAIV 316
           T  R    + S  QRL++LGRM   +AH++R P+++  L A N   AAP    A  +   
Sbjct: 108 TETRLLQSRISDLQRLSSLGRMVASLAHQVRTPLSSAMLYAANL--AAPNLPPATRERFQ 165

Query: 317 GQ-IDRLDGLVQSLLALVQPVALAPVEVVLHRWLDERVAAVAPKADAA--GVQVTLHHDM 373
            + +DRL  L + +  ++        +VV+   + +  A   P  + A    Q+    ++
Sbjct: 166 SKLVDRLHDLEKQVNDMLLFAKGGDNKVVMPFSIGDLAAEFMPMVETALKNNQIDYGQEV 225

Query: 374 P---TSAVFDPVHLARAVDNLLDNAVRHAPRGGHVVLSALQPEARTLAIRVDDDGPGVPE 430
               T  + +   LA A+ NL+ NA++ A +G  + +   +P    L I V D+GPGVPE
Sbjct: 226 ESEETMLLGNANALASALSNLVMNALQIAGKGSQIDVF-FRPVNGELKISVQDNGPGVPE 284

Query: 431 SLQASLFEPFATGRADGTGLGLALAREVALAHGGDLHHVPLT-PGARFELELP 482
           SLQ  + EPF T R+ GTGLGLA+ + V  AHGG L  +     GA F + +P
Sbjct: 285 SLQHKIMEPFFTTRSQGTGLGLAVVQMVCRAHGGRLELISKEGEGACFTMCIP 337