Pairwise Alignments

Query, 235 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

Subject, 270 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 69.7 bits (169), Expect = 5e-17
 Identities = 65/246 (26%), Positives = 102/246 (41%), Gaps = 19/246 (7%)

Query: 7   SPSPRHELALRDYGRSHGSHAHDHFQVLIGL--HGVLEIEVEGRGAGIGAGEAQVIAPGE 64
           S  P   L   DY R      H H  + IGL   GV     +G    +G G   +++P E
Sbjct: 12  SAYPAISLIEADY-RQFAFERHYHLDIHIGLITQGVQRFYHQGAWHQVGQGGVVLMSPDE 70

Query: 65  RHDFNGRKHGSLCLVLDTTQPAWARCAERAPPAATRLH---------TLAHYLAQC---M 112
            HD +   +    + + + +P W +    A      +          TL H L Q    +
Sbjct: 71  LHDGHAHSNTGYQVQVFSIEPEWLQQTLEANQIEQVIGFEQLIVQDPTLFHSLQQLHHLL 130

Query: 113 RQPQASALAL----LHGPALLLEAWSPEPASPDSRRRRIDWALLTDWARARWHEPLGVAD 168
           RQ   S LA       G A LLE +S           + + ALL +W  ++  +P+ +  
Sbjct: 131 RQDNLSQLAKDCLPYQGFAPLLERYSYLKQPTVKPLGQHNLALLKEWVLSQLDQPIRLEQ 190

Query: 169 LADVACLSPSQFAQRCREEQGTSPMHWLRALRLAHARELRLGGLDVAETARRTGYRSPSA 228
           LA +  LSP+QF +  + + G +P  WLR LRL  A +L   G    + A + G+   + 
Sbjct: 191 LAQLCQLSPTQFQRHFKAQTGLTPYAWLRRLRLEQAMKLLQSGKPGTDVAYQVGFYDQAH 250

Query: 229 LTAALR 234
            + A +
Sbjct: 251 FSKAFK 256