Pairwise Alignments

Query, 281 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Variovorax sp. SCN45

Subject, 303 a.a., EamA/RhaT family transporter from Vibrio cholerae E7946 ATCC 55056

 Score = 80.9 bits (198), Expect = 3e-20
 Identities = 69/280 (24%), Positives = 122/280 (43%), Gaps = 15/280 (5%)

Query: 8   LLAIALWATLAS-LGTSLSHLPPFLTTGIALIVGSVPSWPLVLRDRGAWKVPPRTLA--- 63
           L ++ LW+T+A+    +L+ L P     +A IV ++    +         + P  LA   
Sbjct: 11  LASVLLWSTVATAFKLTLAELNPLQMVTVASIVSALALLVICAAMDKLKLIVPTLLANPF 70

Query: 64  ----LGIYGLFGYHFLLFMALRIAPPVEANLVNYLWPLLMVVLAPVLLTGMSLRPVHVVA 119
               LG+     Y+ +LF A  + P  +A  +NY W + + ++A + L G  +R    +A
Sbjct: 71  YYLLLGLINPLAYYLILFKAYSLLPASQAQAINYSWAITLTLMAALFL-GQRIRKQDWIA 129

Query: 120 ALLGFAGAAAAILGAQGAAASGPATSYWGFLPALASAVIWASYSLWTKRVPAFPTSAI-- 177
             + + G    ++  +G        S  G   AL S ++WA Y +   +  A P   +  
Sbjct: 130 CAMSYLG--VVVIATKGDLLGLQFESPLGVGLALLSTLLWAGYWILNTKNKADPIVGVLL 187

Query: 178 GLFGLVSGLLALACHAVLETPAALSGRDWLLLVLCGLGPLGAAFFLWDMALKR-GDARQI 236
           G    +   LAL  H  L     ++ + WL +   GL  +G  F LW  ALK   +  +I
Sbjct: 188 GFLLAIPFALALCWHENLNW-QGITTQGWLAVTYVGLFEMGITFVLWLSALKNTQNTARI 246

Query: 237 GILSYITPLASTALLLAVTGRPLTWSIALAAILIISAALM 276
             L + +P  S  LL  + G  +  +  +  +LII+  ++
Sbjct: 247 SNLIFASPFISLFLLATIIGEAIHPTTLIGLVLIIAGLVV 286