Pairwise Alignments

Query, 475 a.a., integral membrane sensor signal transduction histidine kinase from Variovorax sp. SCN45

Subject, 420 a.a., two component sensor histidine kinase from Sinorhizobium meliloti 1021

 Score =  144 bits (363), Expect = 6e-39
 Identities = 99/270 (36%), Positives = 142/270 (52%), Gaps = 17/270 (6%)

Query: 199 LLAYAYVSRLLRPLIDIREGAQRFGRGEFSQPIPIRRNDDLGDLAQRVNTMADDIQAMLD 258
           L AY  V  L R L  +R G   +G+G+F   +P   +D++  +A+  N  AD ++ ++ 
Sbjct: 149 LAAYPVVRHLTRRLERLRVGVDAWGKGDFVVRVPEDGSDEVAAVAKSFNRAADQVERLIK 208

Query: 259 AKRGLLLALSHELRSPLTRARLNAELLPATPEGQAEREALLRDLNEMRDLISDLLESERL 318
           + R LL   SHELRSPL R R+  +L    P    ++E ++R+L+E+  LI ++L + RL
Sbjct: 209 SHRALLANASHELRSPLARLRMAIDLYEQAPNDDRKQE-IIRNLSELDTLIEEILLASRL 267

Query: 319 ASPHVALQREPVDLAALIRETVAEMPGAQQVHLDLADGLPP-HAVDRMRIRLLVRNLLDN 377
                    E VDL AL+ E  A       V +    G+P   A D   +R LVRNLL N
Sbjct: 268 DHVEKLDALESVDLLALVSEEGAR----NDVEV---FGMPAIVACDARLLRRLVRNLLQN 320

Query: 378 ALRYSNGAPRPPCVSLRAALDGKRQGVEIEVRDHGPGVDEAQLDRLTEPFYRTDGARARA 437
           AL +      PP  +  A  D       + VRDHGPG+ +++  R+ EPFYR  G R+ A
Sbjct: 321 ALHHGG----PPVTAAVAQAD---DAAILRVRDHGPGIADSERHRVFEPFYRPSG-RSEA 372

Query: 438 TGGVGLGMYLCRLIAEAHGGELMVRNASPG 467
            GG GLG+ L R IAE HGG +   +   G
Sbjct: 373 AGGWGLGLALVRQIAERHGGAVSYESPPDG 402