Pairwise Alignments

Query, 303 a.a., SSU ribosomal protein S3p (S3e) from Variovorax sp. SCN45

Subject, 228 a.a., SSU ribosomal protein S3p (S3e) from Pseudomonas fluorescens FW300-N2E2

 Score =  303 bits (775), Expect = 3e-87
 Identities = 146/230 (63%), Positives = 181/230 (78%), Gaps = 10/230 (4%)

Query: 1   MGQKIHPTGFRLAVTRNWSSRWYASDRDFAGMLAEDIKVREYLKKKLKNASVSRVMIERP 60
           MGQK+HP G RL + +  +S WYA  R +A  L  D+KVREYL+ KLK+ASVSR+ I RP
Sbjct: 1   MGQKVHPIGIRLGIVKEHTSVWYADGRTYADYLFADLKVREYLQDKLKSASVSRIDIHRP 60

Query: 61  AKNARITIYSARPGVVIGKKGEDIENLKRELGKQLGVPVAVNIEEVRKPEIDAQLIADSI 120
           A+ ARITI++ARPG+VIGKKGED+E L+++L KQ+GVPV +NIEE+RKPE+D  L+A S+
Sbjct: 61  AQTARITIHTARPGIVIGKKGEDVEKLRQDLTKQMGVPVHINIEEIRKPELDGMLVAQSV 120

Query: 121 TQQLEKRIMFRRAMKRAMQNAMRLGALGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180
            QQLE+R+MFRRAMKRA+QNAMR+GA GIKI  +GRL G EIARTEWYREGRVPLHTLRA
Sbjct: 121 AQQLERRVMFRRAMKRAVQNAMRIGAKGIKIQVSGRLGGAEIARTEWYREGRVPLHTLRA 180

Query: 181 DIDYGTSEAKTTYGVIGVKVWVYKGDTLGRNDLPAVETPRPEEERRPRGP 230
           DIDY   EA TTYGVIGVKVW++KG+ +G            +EE +P+ P
Sbjct: 181 DIDYANYEAHTTYGVIGVKVWIFKGEVIGGR----------QEELKPQAP 220