Pairwise Alignments

Query, 303 a.a., SSU ribosomal protein S3p (S3e) from Variovorax sp. SCN45

Subject, 230 a.a., 30S ribosomal protein S3 (RefSeq) from Shewanella amazonensis SB2B

 Score =  308 bits (790), Expect = 6e-89
 Identities = 149/230 (64%), Positives = 188/230 (81%), Gaps = 2/230 (0%)

Query: 1   MGQKIHPTGFRLAVTRNWSSRWYASDRDFAGMLAEDIKVREYLKKKLKNASVSRVMIERP 60
           MGQK+HP G RL +T+ W S WYA   D+A  L  D +VR++L+KKL+ ASVS+++IERP
Sbjct: 1   MGQKVHPNGIRLGITKPWISTWYADKSDYANNLHSDWEVRKFLEKKLEAASVSKIVIERP 60

Query: 61  AKNARITIYSARPGVVIGKKGEDIENLKRELGKQLGVPVAVNIEEVRKPEIDAQLIADSI 120
           AK+ R+TI++ARPGVVIGKKGED+E L+ E+ K  G P  +NI E+RKPE+DA+L+ADSI
Sbjct: 61  AKSIRVTIHTARPGVVIGKKGEDVEVLRAEVAKISGTPAQINIAEIRKPELDAKLVADSI 120

Query: 121 TQQLEKRIMFRRAMKRAMQNAMRLGALGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180
            QQLE+R+MFRRAMKRA+QNAMR+GA GIK+  +GRL G EIARTEWYREGRVPLHTLRA
Sbjct: 121 AQQLERRVMFRRAMKRAVQNAMRIGAQGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180

Query: 181 DIDYGTSEAKTTYGVIGVKVWVYKGDTLGRNDLPAVETPRPEE-ERRPRG 229
           DIDY TSE+ TTYGVIG+KVWV+KG+ L    LP VE P+ ++ +R+PRG
Sbjct: 181 DIDYATSESHTTYGVIGIKVWVFKGEVLD-GMLPQVEEPKQQQPKRKPRG 229