Pairwise Alignments

Query, 303 a.a., SSU ribosomal protein S3p (S3e) from Variovorax sp. SCN45

Subject, 211 a.a., 30S ribosomal protein S3 from Methanococcus maripaludis S2

 Score = 90.5 bits (223), Expect = 3e-23
 Identities = 53/184 (28%), Positives = 96/184 (52%), Gaps = 4/184 (2%)

Query: 26  DRDFAGMLAEDIKVREYLKKKLKNASVSRVMIERPAKNARITIYSARPGVVIGKKGEDIE 85
           +R F G    +  + EY K KL  A  S +  ++     RIT+++ +PG VIG+KG+ ++
Sbjct: 3   ERTFVGENVSETLIDEYFKTKLVRAGYSHIDFKKTPIGTRITVFAEKPGFVIGRKGKMVK 62

Query: 86  NLKRELGKQLGVP-VAVNIEEVRKPEIDAQLIADSITQQLEKRIMFRRAMKRAMQNAMRL 144
            L   L  +  V    + +++V  P++D  ++   I   LE+ + FR+    A++  M  
Sbjct: 63  ELTETLATEYSVKNPQIEVKQVENPDLDPAVVGHKIASSLERGMHFRKTAHSAIRRVMGS 122

Query: 145 GALGIKIMSAGRLNGIEIARTEWYREGRVPL--HTLRADIDYGTSEAKTTYGVIGVKVWV 202
           GA G+ I+ +G+L+G E +RTE + +G +        A ++     AK   G++GV V +
Sbjct: 123 GAKGVAIIVSGKLSG-ERSRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGIVGVTVKI 181

Query: 203 YKGD 206
            + D
Sbjct: 182 MRPD 185