Pairwise Alignments

Query, 226 a.a., LSU ribosomal protein L3p (L3e) from Variovorax sp. SCN45

Subject, 334 a.a., 50S ribosomal protein L3 from Methanococcus maripaludis S2

 Score = 47.0 bits (110), Expect = 4e-10
 Identities = 48/193 (24%), Positives = 78/193 (40%), Gaps = 21/193 (10%)

Query: 38  RVTQIKSQETDGYVALQVTFGSRKASRV-----TKPEAGHLAKAGVEAGEIIQEFRVTAD 92
           ++T  K +E     AL       KA+ V     T P+   + K   E  EI    R+   
Sbjct: 113 KLTLAKKEEKKTVDALDAVL--EKATEVRAIVHTNPKTTGIPKKKPEVVEI----RIGGS 166

Query: 93  TAGQHKA------GGVIAVNSVFTVGQKVDVQGTSIGKGYAGTIKRHNMSSQRASHGNSR 146
           +  +  A      G  +A++ VF  G+ +D    + GKG+ G++KR  +  Q   H    
Sbjct: 167 SVAERLAYAKEILGKTLAISDVFEAGEIIDTLAITKGKGFQGSVKRWGIKVQFGKHQRKG 226

Query: 147 SHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTRTTQNLDVFRIDEARQLLLIKGAI---PG 203
                GSIG  + P RV     + G +G   RT  N  + ++      +  KG       
Sbjct: 227 VGRHTGSIGPWR-PRRVMWTVPLPGQMGFHQRTEYNKRILKLGSEGAEITPKGGFLNYGA 285

Query: 204 SKGGFVTVRPAIK 216
            K G+V V+  ++
Sbjct: 286 VKNGYVVVKGTVQ 298