Pairwise Alignments

Query, 226 a.a., LSU ribosomal protein L3p (L3e) from Variovorax sp. SCN45

Subject, 212 a.a., ribosomal protein L3 (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  233 bits (593), Expect = 3e-66
 Identities = 118/212 (55%), Positives = 154/212 (72%), Gaps = 1/212 (0%)

Query: 6   SLGLLGRKVGMMRLFTDDGDAVPVTVVDVSNNRVTQIKSQETDGYVALQVTFGSRKASRV 65
           ++GL+GRKVGM R+FT+DG ++PVTV++V+ NRVTQ+K+ ETDGY ALQVT G++KA+R+
Sbjct: 2   AIGLIGRKVGMTRIFTEDGVSIPVTVIEVAGNRVTQVKTLETDGYRALQVTTGTKKANRI 61

Query: 66  TKPEAGHLAKAGVEAGEIIQEFRVTADTAGQHKAGGVIAVNSVFTVGQKVDVQGTSIGKG 125
           TKPEAGH AK+GVEAG  + E R+ AD  G+    G      +F    KVDV G S GKG
Sbjct: 62  TKPEAGHFAKSGVEAGRGLWELRL-ADGEGEGIEVGAELNVGIFADVAKVDVTGQSKGKG 120

Query: 126 YAGTIKRHNMSSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTRTTQNLDV 185
           + G +KR N  +Q  +HGNS SH   GSIG  Q PGRVF GK+M+GH+G    TTQNLDV
Sbjct: 121 FQGGVKRWNFRTQDMTHGNSLSHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLDV 180

Query: 186 FRIDEARQLLLIKGAIPGSKGGFVTVRPAIKA 217
            R+D  R LLL+KGA+PG+  G + ++PA+KA
Sbjct: 181 VRVDVERNLLLVKGAVPGATNGDLIIKPAVKA 212