Pairwise Alignments

Query, 388 a.a., ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 386 a.a., putative amino acid binding protein from Phaeobacter inhibens DSM 17395

 Score =  207 bits (528), Expect = 3e-58
 Identities = 127/386 (32%), Positives = 207/386 (53%), Gaps = 7/386 (1%)

Query: 3   LKTLTTLAV-LGLIATLA--SAQQQQGVTKDEIRIGTIQDLSGPLAGFGKQARNGMQLRV 59
           +KT T   V + L A LA  +    QGV+  EI +G++ DLSG  A  G  A NG  LR 
Sbjct: 1   MKTWTAKLVGVALAAGLAPQAMADTQGVSDSEIVLGSVNDLSGIFAAVGVPAVNGANLRF 60

Query: 60  DELNEQGSVNGRKLKLFVEDSGYDPKKAVLAAQKLVNQEKIFIMAGHIGTAQNMAAMPVQ 119
           DE N  G V+GR+++  VED+GY   +A+    KL+N++++F M   +GT  N+A   + 
Sbjct: 61  DEANANGGVHGRQIRFVVEDNGYQIPRAMQGYNKLLNRDQVFAMLLSLGTPMNIAGFKLL 120

Query: 120 FDKNVINYMPITAAREMYEPLNRLKYSFAATYYDQIRLALPKMIKDKGAKKVCTIYQDDE 179
             K + N  P+TAAR+M +     K+   ++YYDQ++  +  + ++  AK+VC++Y   +
Sbjct: 121 DPKGIPNISPLTAARQMLQDPVDNKFIGFSSYYDQVQAGVSYLAEEFDAKEVCSMYIPSD 180

Query: 180 FGLEVQRGAEAGLKAAGMELTEKTSFKRGATDFSSQVAKMKAANCDLVVLGTIIRETIGT 239
           FG E++ G+       G+    +T+ K    DF   + K+KA  CD+V +   +R+ I  
Sbjct: 181 FGKEIREGSADIAADLGLRFAAETTHKPDELDFVGSLTKLKAEGCDVVTMALGVRQGITV 240

Query: 240 VGEARKTGFNPT-FLGSSAAYTDLIHKLGGKAMDGIYATMTVQNPYTDEQSQ-PLRFWAN 297
           VG A+K G+    FL +SA + +++  + G   DG+YA     +       + P +F A+
Sbjct: 241 VGTAKKLGWTDVKFLNTSAGFLEVVAAVPGGVTDGLYAAAGWADLIARADDEVPAKFMAD 300

Query: 298 KYKTKFNEDPTVFSVYGYVIIDSFIKAATKAGPNLTTDSFIKAMDSITFEPDMFGSPKST 357
            Y+ KF +    F++ GY   ++ + A   AGP LT D+FIK M+S+ F  D     + T
Sbjct: 301 -YEAKFGQPAGGFAMLGYSAANTVVNALEAAGPELTHDNFIKGMESLDFF-DALTDTQIT 358

Query: 358 YTATKRLGNDQSRLSQIKDGKWVVVS 383
           Y      G D   +S +++G W  +S
Sbjct: 359 YGPDDHRGADVIVISVVENGLWKELS 384