Pairwise Alignments

Query, 618 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 563 a.a., AMP-dependent synthetase from Vibrio cholerae E7946 ATCC 55056

 Score =  218 bits (556), Expect = 4e-61
 Identities = 170/579 (29%), Positives = 267/579 (46%), Gaps = 61/579 (10%)

Query: 32  KQRGDSIWMRQKELGIWRSWSWHQTADAVREIAAGLQSIGFAPGECASILSNTVIEWVLA 91
           K+R + ++++Q     +  +++ + AD    + + L+++G  PG+  +++S    EW + 
Sbjct: 28  KERPNEVYLKQIINRQFVEFTYAEVADKALRLVSALRALGADPGDKVALISKNCAEWFIC 87

Query: 92  DLAVLSCGGVSNGIYPTDAASQVHYLCEDSRTTVLFVEDDEQLDKALEVRAGLPGLRCIV 151
           DLA++    +S  I+PT  +  + Y  E S + +L V   +       V A  P L  I 
Sbjct: 88  DLAMMLGDYISVPIFPTAGSETIDYCLEHSESKILIVGKLDDNKATAHVLAERPNLISIS 147

Query: 152 VFDMEGLRDLEDPGVMSLDALRELGRARLSTDPQAVERTVAACRPEDLAILVYTSGTTGK 211
           +           P   +     E         P     T      E L  +VYTSGT+G+
Sbjct: 148 L-----------PYPSAAKCQYEFQTLIKQHQPSEERPTHF---DEKLMSIVYTSGTSGQ 193

Query: 212 PKGAMHSHAGLVYTARGYNTLIAQDEKDERMCFLPLCHIAERMGGEYFAMYTGSILNFVE 271
           PKGAM ++    ++A+     I  +E D    +LPL HI ER+     ++  G +  F E
Sbjct: 194 PKGAMLTYGAFTWSAQQLINHIGIEENDRLFSYLPLAHITERVYIFGSSIIGGVLTAFPE 253

Query: 272 NPETVPENVREIAPTVFTAVPRVWEKFYSGVMIALKEAGPLQQAAYKWSIGVGEAIAAKV 331
           + +T  E+V+   PT+F +VPR+W  F   +   L +                      +
Sbjct: 254 SLDTFIEDVKMHRPTLFISVPRLWTLFQQRIQDKLPQK------------------KLNI 295

Query: 332 LAGEPVGAGLKFKFRLARLLALDNARKLIGIHRSRFLVTGAAPISPELVKWYLALGVPML 391
           L   P    L  K +LA  L LD A         R L  G+AP+SP L++WY ++G+ + 
Sbjct: 296 LLKIPFVNSL-IKRKLADGLGLDQA---------RVLGCGSAPVSPALLEWYRSVGLNIT 345

Query: 392 EVWGMTESCGASTA-VPATRIKPGSIGPATGYNEVRIDPATGEILVRGPNVFMGYLNLPE 450
           E WGMTES   ST   P    K G++G A    E++I     EILVR   +F GY     
Sbjct: 346 EAWGMTESFAYSTLNYPFRADKIGTVGNAGPGIELKI-AEDEEILVRSKGLFAGYYKNDT 404

Query: 451 KTAETIDPEGWLHTGDVGVMDEDGYFRITDRMKDIIITAGGKNVTPSELENELKFSLYIT 510
            TAE+ + +GWLHTGD+G +D +GY  I  R KD   TA GK V P  +E +L     + 
Sbjct: 405 ATAESFNDDGWLHTGDIGSLDSEGYLTIQGRKKDTFKTAKGKFVAPVPIEKKLFEYSRVE 464

Query: 511 DAVVIGDKKPYLTVIVMIDQENVEKFAQDHDVPFSNYESLTRTKEVLDLIQGEIDRVNAK 570
              +IG   P   ++           A  H+ P  +     RT       Q  I R+N++
Sbjct: 465 MMCLIGSGLPAPILL-----------AVPHNFPHFDRARYERT------TQKVIARINSE 507

Query: 571 FARVEQIKKFFLLETQLSAEDEELTPTMKLKRKLVQTKY 609
               EQIK   +++   S ++  LTPT+K+KR +++ KY
Sbjct: 508 LESHEQIKGVLMIKDPWSIDNGILTPTLKIKRHVLEKKY 546