Pairwise Alignments

Query, 506 a.a., 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / Enoyl CoA hydratase (EC 4.2.1.17) from Variovorax sp. SCN45

Subject, 723 a.a., fatty acid oxidation complex subunit alpha FadB from Vibrio cholerae E7946 ATCC 55056

 Score =  160 bits (406), Expect = 1e-43
 Identities = 118/375 (31%), Positives = 183/375 (48%), Gaps = 28/375 (7%)

Query: 10  VIGAGAMGRGIAQIAAQAGSEVLLLDSFAGAAERGLEALAAQWNKLHEKGKIDAAERDAY 69
           V+GAG MG GIA  +A  G  VL+ D    + E G+   A   NK  E+GKID  +    
Sbjct: 319 VLGAGIMGGGIAYQSALKGVPVLMKDIAPHSLELGMTEAAKLLNKQLERGKIDGFKMAGI 378

Query: 70  VARVKAVDAIQELAGCDLVVEAVIEDLEVKRKLFRELEGVVAESATLVTNTSSLSVTAIA 129
           +A +        +   D++VEAV+E+ +VK  +  E+EG+V     L +NTS++ +  +A
Sbjct: 379 LASITPSLHYAGIDQADVIVEAVVENPKVKAAVLSEVEGLVDTETILTSNTSTIPINLLA 438

Query: 130 AGLKRPERVAGFHFFNPVPLMKVVEVVAGFKTASEVCTQLAGYAKQMGHSAVQAQDTPGF 189
             LKRP+   G HFFNPV  M +VE++ G  T+ +   ++  YA +MG S +   D PGF
Sbjct: 439 KSLKRPQNFCGMHFFNPVHRMPLVEIIRGEHTSEDTINRVVAYAAKMGKSPIVVNDCPGF 498

Query: 190 IVNHAGRGYGTEALRIVSEGVADFATVDRILKDQAGFRLGPFELLDLTALDVSHPVMESI 249
            VN     Y      ++ +G A+F  +D++++ Q G+ +GP  LLD+  +D +H      
Sbjct: 499 FVNRVLFPYFAGFSLLMRDG-ANFTEIDKVMERQFGWPMGPAYLLDVVGIDTAH------ 551

Query: 250 YHQYFEEPRFRPSVITAQRLAAGAL------GRKTGEGFYRYTDGVMQQTPEA------- 296
           + Q      F   +  + R A  AL      G+K G GFY+YT     +  +A       
Sbjct: 552 HAQAVMAEGFPTRMAKSGREAIDALYEAKKFGQKNGSGFYQYTVDKKGKPKKAFSDDVLA 611

Query: 297 -PAPVVDGTPSVWVSPRAARRAELLRLVNTLGAQIDSG--AAPAPHSLILVAPLGFDVTT 353
             APV  G P  +  P+      ++ ++N +   ++ G  A+     + LV  LGF    
Sbjct: 612 ILAPVC-GAPQSF-DPQTLIERTMIPMINEVVLCLEEGIIASAQEADMALVYGLGFPPFR 669

Query: 354 VAAVERLDATRTIGI 368
                 LD   TIGI
Sbjct: 670 GGVFRYLD---TIGI 681



 Score = 25.0 bits (53), Expect = 0.009
 Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 1/78 (1%)

Query: 388 TRRDIRDAAHALFARDGKAVSVIRDSGGFVTQRVIGTIVNIAADMCQQRVCSPADLETAV 447
           T  D  +   A  A+ GK+  V+ D  GF   RV+         +  +   +  +++  +
Sbjct: 470 TSEDTINRVVAYAAKMGKSPIVVNDCPGFFVNRVLFPYF-AGFSLLMRDGANFTEIDKVM 528

Query: 448 QLGLGYPRGPLAMGNLFG 465
           +   G+P GP  + ++ G
Sbjct: 529 ERQFGWPMGPAYLLDVVG 546