Pairwise Alignments

Query, 358 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 355 a.a., ABC-type branched-chain amino acid transport system, permease component from Dechlorosoma suillum PS

 Score =  200 bits (508), Expect = 5e-56
 Identities = 123/347 (35%), Positives = 196/347 (56%), Gaps = 14/347 (4%)

Query: 5   FKTSYDQDIRLARHGGHMFWYGL-LVAFLLAAPWVIDEYWL-AQLTFVLIYGIVGLGLML 62
           FKTSY  D ++          GL LV   L  P V  EYW+ A L   LI+ +  LGL +
Sbjct: 9   FKTSYAADQQIFPIRQDRIAIGLILVVAALVVPMVASEYWIKAILIPFLIFSLAALGLNI 68

Query: 63  LAGFTGQFSIGHAAFLGAGAYTQGVLTNL--GVPFPLALVAAAALSAAVGVVVALPALRV 120
           L G+ GQ S+G AAF+  GA+          G+P  LA V     +AAVG++  LP+LR+
Sbjct: 69  LTGYAGQLSLGSAAFMAVGAFAAYNFMGRIEGMPVLLAFVGGGLSAAAVGILFGLPSLRI 128

Query: 121 KGIYLGIATLSFGFIVEEVFAR--WESVTGGNAGLHVKSPQLFGWSLGSGEGFYFLCLVV 178
           KG YL +ATL+  F +     +  W S+   +  +  +  Q+ G+   +    Y L L +
Sbjct: 129 KGFYLAVATLAAQFFIVWALTKFGWFSMDSSSGVITAQEIQILGYRFDTPISLYLLVLTI 188

Query: 179 AVLATLGILNLLRSPTGRAFVAIRDSEISAQSMGIHLARYKTMSFAISAALAGLGGALYA 238
             +  L   N++RS  GRA++A+RD +++A+ +GI +   K ++FAIS+   G+ GALYA
Sbjct: 189 VAVMALAAKNMVRSSVGRAWMAVRDMDVAAEVIGIRIMHTKLLAFAISSFYCGVAGALYA 248

Query: 239 HK-LSFISPDQFSILQSIDLLLMVVIGGLGSVHGAFLGAIFLIAMPQLISI-GKDW---- 292
           +  L  + P+ F++  S  +L M++IGG+GS+ G+FLGA F++ +P  + +  +D+    
Sbjct: 249 YAYLGTVEPEGFNLDLSFKILFMIIIGGVGSIMGSFLGAAFIVLLPIFLDVLIQDFLTGL 308

Query: 293 LPEAIGQAPGLQGLVYGVVLIAFVLFEPLGLYGRWLKVRTWLQLFPF 339
           LP +I  +  LQ +V+G ++I F++ EP GL   W   +  L+L+PF
Sbjct: 309 LPPSI--SSNLQLMVFGGLIIFFLIVEPHGLARLWQIGKEKLRLWPF 353