Pairwise Alignments

Query, 371 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Variovorax sp. SCN45

Subject, 334 a.a., TRAP-type periplasmic solute-binding protein from Sinorhizobium meliloti 1021

 Score = 48.9 bits (115), Expect = 2e-10
 Identities = 38/137 (27%), Positives = 64/137 (46%), Gaps = 5/137 (3%)

Query: 167 KPVAKAEDMKGLKFRTV--GLAVDVFTDMGAAVNPLPGGEIVPALDRGLIDAAEFNNASS 224
           +PV K ED +G+K R +   + +D F ++GA   P+  GE+  AL+   IDA E    + 
Sbjct: 157 RPVTKWEDFEGMKVRVMQNNIFLDTFQNLGANATPMAFGEVFSALETKAIDAQENPYVTI 216

Query: 225 DRVLGFPDVAKNCMLQSFHQSGEQFEVLFNGSKLKSLPPELKSIIEYATQAASADMSWKA 284
           D    F +V K   +   + +   F  LF+     S  PE ++ +         +     
Sbjct: 217 D-TSKFFEVQK--YVTETNHAYTPFLFLFSKPIFDSYTPEEQAALRECAVVGRDEERKVI 273

Query: 285 IDRNSKDYEELKKAGIK 301
            D N K  E++K+AG++
Sbjct: 274 QDLNKKSLEKIKEAGLE 290