Pairwise Alignments

Query, 371 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Variovorax sp. SCN45

Subject, 332 a.a., C4-dicarboxylate transport system, C4-dicarboxylate-binding protein precursor signal peptide from Sinorhizobium meliloti 1021

 Score = 71.2 bits (173), Expect = 4e-17
 Identities = 85/349 (24%), Positives = 140/349 (40%), Gaps = 46/349 (13%)

Query: 10  RGLLKGAAVAAGAMSVPMVSMAQTTSLRFQSTWPAKDIFHEYALDYAKKVNDMAGNRLKI 69
           RGL          +S    +MA+TT +R          +H+ + D+AK+V++    R+KI
Sbjct: 10  RGLAATVIAGIVGLSAHSAAMAETT-IRLGHVLADTHSWHKASTDFAKEVSEKTEGRVKI 68

Query: 70  EVLPAGSVVPAFQLLDAVAKGTLDGGHGVVAYWYGKNSALALWGSG------PGYGMDAN 123
           E+ P+G +    ++++ +  GT+ GG               L GSG      P +G+   
Sbjct: 69  EIFPSGQLGTEKEVIEGMQIGTIQGG---------------LIGSGSFQFVEPKFGI-IE 112

Query: 124 MILAWHTYGGGKALMDEIYKGLNLDVASYLYGPMPTQPLGWF----------KKPVAKAE 173
           M  AW +     A +D    G      + L  P   + L W+          K P+ K  
Sbjct: 113 MPYAWTSREQAFAALD----GKLGTALADLLRPKGIEVLAWWENGFRNITNNKHPIVKPA 168

Query: 174 DMKGLKFRTV--GLAVDVFTDMGAAVNPLPGGEIVPALDRGLIDAAEFNNASSDRVLGFP 231
           D+ G+K R     + +  F  +GA   PL  GE+  AL +G+ DA E N  S      F 
Sbjct: 169 DLAGIKIRVTPDKVRLATFERLGAQPAPLAFGELYSALQQGVFDAQE-NPLSIIDASSFY 227

Query: 232 DVAKNCMLQSFHQSGEQFEVLFNGSKLKSLPPELKSIIEYATQAASADMSWKAIDRNSKD 291
           +V K   +           V  +      + PE ++I++ A             D     
Sbjct: 228 EVQKYVSMTGHIWGAACLTV--SSMTWAQVSPEDQAIVKEAAVKWGNAQRQMVADNEVAL 285

Query: 292 YEELKKAGIKFYKTPDAV-LRAQLASWDKTIAKKSAENPMFKKVLDSQR 339
            E+LK  G++F +   A  + A    W+   ++K    P   +V+DS R
Sbjct: 286 IEKLKSKGMQFNEVDKAAFVDALKPIWE---SEKDVFGPELLEVMDSYR 331