Pairwise Alignments

Query, 628 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Variovorax sp. SCN45

Subject, 425 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  101 bits (252), Expect = 6e-26
 Identities = 59/197 (29%), Positives = 107/197 (54%), Gaps = 7/197 (3%)

Query: 35  LGLLMLSLVVVAIMLGFPTAFTLMGMGMIFTWLAYDRDWNRTLDLMVQSAFKTMANDVLI 94
           +G L+++  +   MLGFP  + ++   +++  +           L+ Q     + +  L+
Sbjct: 1   MGFLVVAAFLGLFMLGFPVVYAILLPSILYVLVE-----GLPFGLLAQRITYALDSFPLV 55

Query: 95  AVPLFVFMGYLVERANLIESLFKSLHLALARLPGALAVATLVTCTIFATATGIVGAVVTL 154
           AVPLF+F+G L+  + + + +F+  +  + R+PG LA   +    IF+  +G   A +  
Sbjct: 56  AVPLFIFVGNLMNLSGITDRIFRFAYTLVGRMPGGLAQVNVFGSLIFSGMSGAALADIGG 115

Query: 155 MGLLALPAMLRAGYSVPLAAGSITAGGC-LGILLPPSVLLIVYGATAGVSVVQLYAGAFF 213
           +G + + AM + G+  P  AG++TA    LG + PPS+ LIVYG+   VS+VQL      
Sbjct: 116 LGRIEIDAMKKRGFD-PSFAGAVTAASATLGPIFPPSIPLIVYGSVTSVSIVQLLVAGIM 174

Query: 214 PGLMLSSLYVLYVIIVA 230
           P ++ ++L +L V+IVA
Sbjct: 175 PAVLCTALLMLTVLIVA 191



 Score = 95.9 bits (237), Expect = 3e-24
 Identities = 62/214 (28%), Positives = 110/214 (51%), Gaps = 3/214 (1%)

Query: 414 LASFFPLMLLIFSVLGSIVLGLATPTEAAAMGALGGMLLAAA-YRRLNLAVLKESVFLTA 472
           L    P +L    ++G +  G  TPTEAAA+ A+  + ++   YR L  A L  S  LTA
Sbjct: 212 LVPALPAILAPALMVGGMTAGAFTPTEAAAITAVYVIFISGVLYRELTPAHLWHSAVLTA 271

Query: 473 KTSAMVCWLFVGSAIFSAAFALLGGQALVEEWVLGMNLTKVEFLILSQVIIFLLGWPLEW 532
           ++S+ +  +   +A+F    A+          +LG +   +  LI++ +I F+ G  L+ 
Sbjct: 272 RSSSAILIIVASAALFGWILAVEQVPQTFAAALLGWSKDPLMLLIIANLIFFVAGMFLDS 331

Query: 533 TEIIVIFMPIFIPLLDNFGVDPLFFGLLVALNLQTAFLSPPVAMAAFYLKGVSPPHVTLN 592
           T   ++ +PI  P L   GVDP+  G++   NL    L+PP+ ++ F +  ++   V++ 
Sbjct: 332 TTATLLLVPIIAPPLVMAGVDPVQLGIVTIFNLMLGLLTPPMGLSLFLVSDIA--KVSIR 389

Query: 593 QIFLGMLPFMGIQVLAIVLLYMWPQIGLWLPQLL 626
           Q+   ++PF    V  +V+L +     LWLP+L+
Sbjct: 390 QLLRALVPFYIPLVSTLVILTLAKDFTLWLPRLI 423