Pairwise Alignments

Query, 288 a.a., ABC transporter, permease protein 2 (cluster 1, maltose/g3p/polyamine/iron) from Variovorax sp. SCN45

Subject, 266 a.a., ABC transporter permease from Methanococcus maripaludis S2

 Score = 72.4 bits (176), Expect = 1e-17
 Identities = 61/258 (23%), Positives = 117/258 (45%), Gaps = 24/258 (9%)

Query: 41  IYGLYLLLPIVLLMIGSVGGNWTNTLLPTGITGQWYVDLWLDTSFRKAFVSSLVVAMSAC 100
           ++ L + +  +L+++ S+          T I+ + + D       + A   SL  A  A 
Sbjct: 12  LFALSVFILFILMIVMSI---------VTNISFETFYDSLFSKEIQFAIKLSLETASIAT 62

Query: 101 AINTVLALPLAYALYHGARRGGSLAARIVSATPVAVPAITLAFGYMIVFNT--------- 151
            + T+L +P AYAL     +G  +   IV   PV +P +   F  ++ F           
Sbjct: 63  ILGTLLGVPAAYALARYNFKGKDIVDSIVEL-PVILPPLITGFALLVFFGNTVFGKFITE 121

Query: 152 DLAPWLGSMPLLIAAHAILTLPYLTNTLLADLRHLDLGRLEQAAATLGASGWQQFTGIVL 211
           ++   L +    I A   +  P++  T  +    +D  + E  A +LG+  ++ F  +V+
Sbjct: 122 NIIEILFTYKGTIVAQFFVATPFIIRTSKSVFECID-EKYELIAQSLGSKKYESFLDVVI 180

Query: 212 PSLRQSLISGLVMVAAISVGEFGVSNLL---TSFQNRTYPV-VLLQAFYGATGFACAATV 267
           P  +  +I+G ++  A S+GEFG + +L   T  +  T P+ V L    G    A A ++
Sbjct: 181 PMAKNGIIAGAILAWARSIGEFGATMMLAGATKMKTETLPIAVFLNISLGDLEKALAVSL 240

Query: 268 ILLVLASASALLSSSLVK 285
           I L++A+   ++  S++K
Sbjct: 241 IFLLVATLVLVIIRSVLK 258