Pairwise Alignments

Query, 314 a.a., Efflux ABC transporter, ATP-binding protein from Variovorax sp. SCN45

Subject, 305 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  154 bits (388), Expect = 3e-42
 Identities = 99/297 (33%), Positives = 159/297 (53%), Gaps = 9/297 (3%)

Query: 14  VSRLRKRY-GETTVVDDLSFEIAPGECLGVIGPNGAGKTTTIRMCLGLTAPDGGEISALG 72
           + +LRK Y G    +  +S ++  G+   ++GPNGAGK+TTI +   L     G+++  G
Sbjct: 6   IEQLRKTYAGGFEALKGISLQVKKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVTVFG 65

Query: 73  LQMPRDALAIKAQLGVVSQFDTLDPDFSCAENLVV-YGRYFGFGKAQVRARVPQLLEFAA 131
             +       K +LG+V Q    +P F   E +V+    Y+G  KA  + R  + L    
Sbjct: 66  YDLDSQLELAKQKLGLVPQEFNFNP-FETVEQIVLQQAGYYGVPKALAKERAKKYLTQLD 124

Query: 132 LSHKADAKPGELSGGMRRRLSLARALVNDPKLLLLDEPTTGLDPQARHLMWERLQVLLQQ 191
           L  K   +   LSGGM+RRL +ARAL+++P+LL+LDEPT G+D + R  MWE L+ +  Q
Sbjct: 125 LWEKRSERARNLSGGMKRRLMIARALMHEPQLLILDEPTAGVDIELRRSMWEFLKQINAQ 184

Query: 192 GKSILLTTHFMDEAERLCSRLLVLDHGRKIAEGRPRDLIAE-HLEPDVVEVYGNGALSLA 250
           G +I+LTTH+++EAE LC  + ++  G  I     + L+ + H+E  V++V GN  ++  
Sbjct: 185 GVTIILTTHYLEEAEMLCRHIGIIQRGELIENTTMKSLLGKLHVETFVLDVDGNAPIAPL 244

Query: 251 ESAELKAMAARVEVSGETVFFYTQDARRLLEALTRHG--GLRTFHRPANLEDLFLKL 305
           +    + M   VE S E     +Q    +   LT  G   L   ++   LE+LF+ +
Sbjct: 245 QGVVKQQM---VEGSLEIELEKSQGINHVFTQLTEQGVKVLSMRNKVNRLEELFVSI 298