Pairwise Alignments

Query, 257 a.a., 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) from Variovorax sp. SCN45

Subject, 245 a.a., 3-deoxy-D-manno-octulosonate cytidylyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  171 bits (432), Expect = 2e-47
 Identities = 103/248 (41%), Positives = 140/248 (56%), Gaps = 13/248 (5%)

Query: 1   VSFTVLVPARLASTRLPNKPLADIAGVPMVVRVARRAG-ESGAARVVVAGDDASIIDACK 59
           ++ T+L+PAR  S+R P KPLA I G PM+  V  RA    G   + VA DD  I  A +
Sbjct: 1   MNVTLLIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTNIYVATDDERIKSAVE 60

Query: 60  AHGVEAILTRQDHPSGTDRLAEACEQLGLDGDDIVVNVQGDEPLIAPALIDAVASTLAAH 119
             G + ++T  D  SGTDR+ +A  QLGL  DD+V+N+QGD+PLI P  I+ V S    H
Sbjct: 61  GFGGKVVMTSPDAASGTDRINDAINQLGLKDDDLVINLQGDQPLIDPTSIEQVISLFERH 120

Query: 120 -AEAAMSTAAHEIDSLADFMNPNVVKAVLDAQGNAMYFSRAPIPWWRDGSANGAAPAVLP 178
             E  M+T  +EI + A+  +P  VK V D    A+YFSRA IP+ RD            
Sbjct: 121 PGEFEMATLGYEIVNKAELDDPMHVKMVFDNDYYALYFSRARIPFGRDTKDYPV------ 174

Query: 179 TPAPLRHIGIYGYRAGFVRKFPSLPPSPVEATEALEQLRALWHGHRIAVHVSHVAPGPGI 238
                +H+G+Y Y   FV+ F +LP   +E  E LEQLRAL +GH+I V +S       +
Sbjct: 175 ----YKHLGVYAYTRRFVQAFAALPLGRLEDLEKLEQLRALEYGHKIKVAIS-AFDSIEV 229

Query: 239 DTPEDLAR 246
           DTPED+ +
Sbjct: 230 DTPEDIRK 237