Pairwise Alignments

Query, 306 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 304 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  171 bits (434), Expect = 1e-47
 Identities = 99/295 (33%), Positives = 166/295 (56%), Gaps = 7/295 (2%)

Query: 4   RLQGIEEFVAAVEAGSFALAAQRLHVTRSAVAKSIARLEARLNTRLFLRTTRSQSLTEEG 63
           R+  ++ F A V+ GSF  AA RL ++   V+K +++LE  L  RL  RTTR  ++TE G
Sbjct: 5   RIDTMKAFTAVVQEGSFTKAADRLGLSSQLVSKYVSQLEEHLKVRLLNRTTRRVNVTEAG 64

Query: 64  HGYYERCRRALAELEAAEAVADVARSTASGLVRLSMPAMLGRLKVGPLLLALARRHPQLS 123
             Y+ERC++ L ++E  +        TASGL+++S P   G   +   L+   ++HP + 
Sbjct: 65  RAYFERCQQVLIDIEEMDNALTNLSETASGLLKVSAPMSFGIHHLPSALVQFQQQHPDVR 124

Query: 124 LELSFNDRRVDLAEEGLDLAIRSGELADTDELVARPVGMQWMALCAAPAYLAERGHPRGV 183
           L+++  D++VDL E+G+D+A+R G+L  +  L+A+ +    + +CA+P YLAERG P+  
Sbjct: 125 LDITLTDKKVDLLEDGVDVALRIGQLT-SSSLIAKKLTPIKLVVCASPEYLAERGEPKTP 183

Query: 184 AELAAPHEAVLYARDGQVSAWRFHAAEGGPAEPTEVTLPSRLRCDSAEVLLEAAIGGMGL 243
           A+L   H   L+     + A      E   A    + +PS L C++ ++L+EAAI G G+
Sbjct: 184 ADLI--HHNYLHFSYSDLGAAFGRFGEHFSA----LKIPSDLACNNGDMLVEAAIAGRGI 237

Query: 244 ARLPAWLAADALAAGTLVRVFDEPQPFGFALHVIRSRSRYLPLKTRVVVDWLAEH 298
              P +L + AL +G L  +  +  P  F L+ +    ++L  K R  VD L+++
Sbjct: 238 VVQPTFLVSKALRSGKLKAILTDYTPEPFGLYAVYVHRKFLASKVRCFVDALSQY 292