Pairwise Alignments

Query, 369 a.a., Multidrug efflux system, membrane fusion component => MexH of MexHI-OpmD system from Variovorax sp. SCN45

Subject, 398 a.a., RND family efflux transporter, MFP subunit from Dechlorosoma suillum PS

 Score =  183 bits (465), Expect = 6e-51
 Identities = 113/324 (34%), Positives = 178/324 (54%), Gaps = 8/324 (2%)

Query: 32  AHAEGGGMP--PAKVAVATAQKTQVARFLSGIGTLEANRQVEVPAEVEGRVAKILFTPGG 89
           A A G G P  P  V  A A    +    + +GTL +N  V +  E  GR+A I F  G 
Sbjct: 43  AKAGGAGAPAAPLPVETALAAPQSITDEAAAVGTLRSNESVVLRPETAGRIASIGFKDGV 102

Query: 90  EVRAGQLLVQLNDAPEQGDMERLTAQRANAKALLERTRRLLPQQAATQEQLEQAQAAFDQ 149
            V  G +LV L+ A ++ ++++  A  A A    +RT  LL ++  +Q+ L+   A    
Sbjct: 103 PVAKGTVLVALDAATQEAELQQAKANHALAVTNFKRTEELLAKKFISQQSLDTTAANLKV 162

Query: 150 ASGDLRRAQAVLEQKRIKAPFDGVLGIRRVNLGQFVRAGDALVSLTDSRTLFANLTLPET 209
               +  A+A L + RI+APF GV+GIR V++G +V+ G  L++L D RTL  +  LPE 
Sbjct: 163 QEAAVALAEAKLAKTRIRAPFAGVVGIREVSVGDYVKEGADLINLEDIRTLKLDFRLPEL 222

Query: 210 ALPVLKRNQQVALSVDAYPGRVFQGRLSTIEPQIGSDTRTVRLQATIDNADGALTPGMFV 269
            L  L++ Q V +SVDA P + F+  L  ++P + ++ R + L+A +DN +  L PGMF 
Sbjct: 223 YLSRLQKGQAVEVSVDALPNQAFKAVLDAVDPLVDANGRAISLRARLDNPELKLRPGMFA 282

Query: 270 NGKVALPARPDAITVPETAITYSTHGDSVFVVRPAEKGDGFTAQQVFVKAGERQDGLVVI 329
             ++    R   + +PE AI       +VF +   E+G    A++V VK G R++  V I
Sbjct: 283 RVRLLFGNRDGVLMIPEQAIVSGGGKQTVFRI---EEG---KAKKVEVKTGLRRNAQVEI 336

Query: 330 ENGLAPGDKVVTSGQLRLYTGAAV 353
            +GLA GD+++T+GQL++  G+ V
Sbjct: 337 LSGLAAGDRIITAGQLKVQDGSPV 360