Pairwise Alignments

Query, 1026 a.a., Multidrug efflux system, inner membrane proton/drug antiporter (RND type) => MexI of MexHI-OpmD system from Variovorax sp. SCN45

Subject, 1048 a.a., Multidrug efflux pump subunit AcrB from Enterobacter sp. TBS_079

 Score =  506 bits (1304), Expect = e-147
 Identities = 326/1035 (31%), Positives = 550/1035 (53%), Gaps = 41/1035 (3%)

Query: 5    DLFVRRPVLALVVSTLILLLGARALGDLPVRQYPLTESTTLTITTQYPGASPELMQGFVT 64
            + F+ RP+ A V++ +I+L G  A+  LPV QYP      +TI+  YPGA  + +Q  VT
Sbjct: 3    NFFIDRPIFAWVIAIIIMLAGGLAILKLPVAQYPTIAPPAVTISATYPGADAKTVQDTVT 62

Query: 65   QPIAQAVATIENVDYLSSSS-TLGRSVISVRMKLNADANQALTQAMAQISQVKYRLPAEA 123
            Q I Q +  I+N+ Y+SS+S + G   I++  +   DA+ A  Q   ++      LP E 
Sbjct: 63   QVIEQNMNGIDNLMYMSSNSDSTGTVQITLTFQSGTDADIAQVQVQNKLQLAMPLLPQEV 122

Query: 124  FDPVIL--KSSGEATAVAYVGFSSKTMPMPALTDYLSRVVQPQFASITGVSGVEVSGGQT 181
                +   KSS     V  V  ++ TM    ++DY+   ++   +  +GV  V++ G Q 
Sbjct: 123  QQQGVSVEKSSSSFLMVVGVINTNGTMTQEDISDYVGANMKDAISRTSGVGDVQLFGSQ- 181

Query: 182  LAMRVWLDPNRMAARGISAGELADALRQNNVQAAPGQ------VKGLYVVSNIRVNTDLV 235
             AMR+W+DPN++    ++  ++ +A++  N Q A GQ      VKG  + ++I   T L 
Sbjct: 182  YAMRIWMDPNKLNNFQLTPVDVINAIKAQNAQVAAGQLGGTPPVKGQQLNASIIAQTRLT 241

Query: 236  NVAEFRDMVVKRDGDAI-VRLGDVATVELGAASADSSATMDGVPAIYLGLQAAPNGNPLV 294
            +  EF  +++K + D   VRL DVA VELG  + D  A  +G PA  LG++ A   N L 
Sbjct: 242  SADEFSKILLKVNQDGSQVRLRDVAKVELGGENYDIIAKFNGKPASGLGIKLATGANALD 301

Query: 295  IVKRIRELLPGIKQNLPPGVEVQLPFELARFIEASIDEVQKTLLEAIAIVVIVIFLCLGS 354
                IR  L  ++   P G+++  P++   F++ SI EV KTL EAI +V +V++L L +
Sbjct: 302  TATAIRAELKKMEPFFPSGLKIVYPYDTTPFVKISIHEVVKTLAEAIILVFLVMYLFLQN 361

Query: 355  VRAVLIPVVTIPLSMLGAAALMLLFGFSINLLTLLAMVLAIGLVVDDAIVVVENVHRHI- 413
             RA LIP + +P+ +LG  A++ +FG+SIN LT+  MVLAIGL+VDDAIVVVENV R + 
Sbjct: 362  FRATLIPTIAVPVVLLGTFAILAIFGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVMA 421

Query: 414  EEGKSRVQAALIGAREVAGPVIAMTLTLAAVYAPIGLMGGLTGSLFKEFAFTLAGAVVVS 473
            EEG    +A      ++ G ++ + + L+AV+ P+   GG TG+++++F+ T+  A+ +S
Sbjct: 422  EEGLPPKEATRKSMGQIQGALVGIAMVLSAVFIPMAFFGGSTGAIYRQFSITIVSAMALS 481

Query: 474  GVIALTLSPVMSSFLLPQDTTGSRMARAAEAFFHKLATGYGRLLDVSLHHRW-------- 525
             ++AL L+P + + +L     G       + FF      + R+ D S HH          
Sbjct: 482  VLVALILTPALCATMLKPVQKGGHGEH--KGFFG----WFNRMFDKSTHHYTDSVGNILR 535

Query: 526  VTGVFAAL---VLASLPFLYNSAQRELAPGEDQAMVLTAIKSPQHANIDYVEKFGKKWDE 582
             TG +  L   ++  + +L+        P EDQ + LT  + P  A+ +  +K   +  +
Sbjct: 536  STGRYLLLYIIIVVGMAYLFVRLPSSFLPDEDQGVFLTMAQLPAGASQERTQKVLDEVTD 595

Query: 583  VFAALPENTGR--WLING----SDGVSNSIGGVQLSDWKDR---KRNADQIQGDTQGRMN 633
             +    +      + +NG      G +  I  V L DW +R   +   + I G   G  +
Sbjct: 596  YYLTKEKANVESVFAVNGFGFAGRGQNTGIAFVSLKDWSERPGEENKVEAITGRAMGTFS 655

Query: 634  DVEGSSVFAFQLPSLP--GSTGGLPVQMVIRSAADHRTVFEAMEAL-KKSARDSGKFIVV 690
             ++ + VFAF LP++   G+  G   Q++ +    H  + +A   L  + A+     + V
Sbjct: 656  QIKDAMVFAFNLPAIVELGTATGFDFQLIDQGGLGHEKLTQARNQLFGEVAKHPDLLVGV 715

Query: 691  DSDLEFNNPTVEIRVDRAKANSLGVTMKSIGDTLAVLVGENYVNRFGMDGRSYDVIPQSP 750
              +   + P  +I +D+ KA +LGV++  I  TL    G +YVN F   GR   V   S 
Sbjct: 716  RPNGLEDTPQYKIDIDQEKAQALGVSISDINTTLGAAWGGSYVNDFIDRGRVKKVYVMSE 775

Query: 751  REQRLTAEALSRYFVKSASGQPVPLANLVQLSTSVGPNKLTQFNQLNASTFQAIPAPGVT 810
             + R+    ++ ++V+  +GQ VP ++        G  +L ++N L +       APG +
Sbjct: 776  AQYRMLPNDINNWYVRGNNGQMVPFSSFSTSHWEYGSPRLERYNGLPSMEILGQAAPGRS 835

Query: 811  MGDAVAFLSEEAKKLPAGFSYDWQSDARQFTQEGSALVMAFVFAIVVIYLVLAAQYESLR 870
             G+A+  + E A KLPAG  YDW   + Q    G+     +  +++V++L LAA YES  
Sbjct: 836  TGEAMNLMEELAGKLPAGIGYDWTGMSYQERLSGNQAPALYAISLIVVFLCLAALYESWS 895

Query: 871  DPLIILISVPMSICGALVPLALGFGTINIYTQIGLVTLIGLISKHGILMVEFANEIQMNK 930
             P  +++ VP+ + GAL+       T ++Y Q+GL+T IGL +K+ IL+VEFA ++   +
Sbjct: 896  IPFSVMLVVPLGVIGALLAATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMEKE 955

Query: 931  GLDRRASIEEAARIRLRPILMTTAAMVVGLVPLLFASGAGANSRFSIGLVIVVGMLVGTL 990
            G     +  +A R+RLRPILMT+ A ++G++PL+ ++GAG+ ++ ++G  ++ GM+  T+
Sbjct: 956  GKGLIEATLDAVRMRLRPILMTSLAFILGVMPLVISTGAGSGAQNAVGTGVMGGMVTATV 1015

Query: 991  FTLFVLPTMYTLLAR 1005
              +F +P  + ++ R
Sbjct: 1016 LAIFFVPVFFVVVRR 1030