Pairwise Alignments

Query, 477 a.a., Multidrug efflux system, outer membrane factor lipoprotein => OpmD of MexHI-OpmD system from Variovorax sp. SCN45

Subject, 482 a.a., efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family from Pseudomonas stutzeri RCH2

 Score =  384 bits (987), Expect = e-111
 Identities = 222/461 (48%), Positives = 286/461 (62%), Gaps = 10/461 (2%)

Query: 11  FALSLLVLA--GCAVGPKYTAPSDAPVAISAPERSLFAGDAVQRDWWRQLDDPQLDALID 68
           FALSLL LA   CAVGP Y AP   P  IS      +     +  WW+Q +DP LDAL+ 
Sbjct: 4   FALSLLSLALSACAVGPDYRAPQPEPARISQAASGDYDRSRFEAAWWQQFEDPTLDALVG 63

Query: 69  RALAENHEIRIAQARLLEARATQTEAELDRLPVVTASASKTRGIAQGNDGLQPDV---RS 125
            ALAEN E+RIA ARL  ARA + +   DRLP VTA AS   G AQ     QP V   R 
Sbjct: 64  EALAENRELRIAYARLRAARAIRDDVSNDRLPTVTAGASADIGKAQ-----QPGVTEQRV 118

Query: 126 LSQSSRAGFDASWEIDLFGRLKRLDEAATARAEASAADLEQVRIVAVAELARNYYEMRGA 185
            ++    G D +WE+DLFGR++R  E++ A+A+A  A+L Q+++  +AEL   Y ++RGA
Sbjct: 119 NAERYDLGLDMAWELDLFGRIQRRLESSEAQADAVEAELYQLQVSLIAELVDAYGQLRGA 178

Query: 186 EQRIAVTRRTLDSLRQSLRVTEAQVRTGRGLEGDLASAQANLATTESQLPALETARRQSA 245
           + R  + R  L + R S  +TE     G G E D+  A A LA TE+ LP L   + ++ 
Sbjct: 179 QLRERIARDNLANQRNSHELTEQLREAGVGSELDVLRADARLAATEASLPQLRAQQARAR 238

Query: 246 YRVAVLAGLRPAELEPMLRPQPLRVLDKRLPIGDMADLLRRRPDVLRAERGLAASTADVG 305
            R+A L G R  +L   L P+ L  + K LPIGD  +LLRRRPD+  AER LAA+TADVG
Sbjct: 239 NRIATLLGQRADQLAVDLAPRDLPAIAKALPIGDPGELLRRRPDIRAAERQLAAATADVG 298

Query: 306 AVTAELYPRFDIGGFLGFIALRGSDLGSSSSRAFSVTPGVSWPALRLGSVKARVRGAEAR 365
             TA+L+PR  + GFLGFIA RGS +GSS+++A+ V P +SW A  LGSV+AR+RGAEA 
Sbjct: 299 VATADLFPRVSLSGFLGFIAGRGSQIGSSAAQAWGVAPSISWAAFDLGSVRARLRGAEAD 358

Query: 366 AQGDRALYEQTVLRAIEDVEGALTGYGQNQLRLQRLVEASARSGRAAELAEVRYREGAAP 425
           A    A YE  VL A+E+ E A + Y   Q RL  L+  S  S  AA  AE+RYREG A 
Sbjct: 359 ADAALASYEHQVLLALEESENAFSDYANAQQRLLSLLRQSTASRAAARQAEIRYREGTAD 418

Query: 426 YLSVLDAQRTLLRAQDAVAEAETASYTSLVALYKALGGGWQ 466
           +L +LDA+R  L A+DA A+AE   Y  +VALYKALGGGW+
Sbjct: 419 FLVLLDAERERLTAEDAQAQAEVELYRGVVALYKALGGGWE 459