Pairwise Alignments

Query, 640 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 549 a.a., AMP-binding protein from Methanococcus maripaludis S2

 Score = 94.0 bits (232), Expect = 2e-23
 Identities = 118/505 (23%), Positives = 199/505 (39%), Gaps = 103/505 (20%)

Query: 25  WTWNAVAQEVREMACGLASLGFKAFDNLAIVGANRPHLYMAVIAAQSLRGVPVPLYQDAV 84
           +T+    +    +A GL  +G K  D++ I   N P     + A   +  V V +     
Sbjct: 34  FTYKEFDERTDLLAKGLLEIGIKKGDHIGIWARNVPDWLTFMFATAKIGVVLVTVNTAYK 93

Query: 85  AGEMVFMLQDAGIEFVIVEDQEQVDKLLEC--------RDIQQGKL-----PAIRHVIYD 131
           + E+ ++++ + ++ + + D  +    LE         +  Q+GKL     P +++VIY 
Sbjct: 94  SHELAYVMKQSDMKALAIIDSFRDVNYLEILYELVPELKTSQRGKLNSEEFPYLKNVIYV 153

Query: 132 DPKGLRHYDQPGLMSYEQLRALGREFDKANPGYYDRAVASGEATDVGVILYTSGTTGRPK 191
             +  R     G+ +  +L  LG             A    ++ DV  + YTSGTTG PK
Sbjct: 154 GQEKHR-----GMYNTTELMLLGNYVSDEK---LIEAKKGLDSDDVINMQYTSGTTGFPK 205

Query: 192 GVCQTHASFIAAGRGGVETDRLGPGDNIMSYLPMAWVGDHLFSVAQWLVGGFTLNCPESS 251
           GV  TH + +  G    E  +    + +   +P+      +  V   L  G TL      
Sbjct: 206 GVMLTHKNILNNGYYIGEKQKFTEEERLCLPVPLFHCFGIVLGVLALLTHGGTLV----- 260

Query: 252 ETVMNDMREIGPSYYFGPPRTFEGLLTAVSIRMEDAAAPKRWLYAKFMALARRVGADILN 311
                 M EI           F+ LL   +I+ E   A                      
Sbjct: 261 ------MLEI-----------FDPLLVLAAIQKEKCTA---------------------- 281

Query: 312 GAPVGMGDRALYALGNLLIYG---PLRNVLGMSRIRVAYTAGAAIGPDLFR------FYR 362
                     +Y +  + I     P+  +  +S +R    AG+    +  +      + R
Sbjct: 282 ----------VYGVPTMFIAEFSHPMFEMFDLSSLRTGIMAGSTCPIEAMKKVMSDMYMR 331

Query: 363 SIGVNLKQFYGQTETC---AYVCLQQDGKVKLQTVGTAAPGIELKIAAD----------- 408
            I ++    YG TE         +    + ++++VG A P  E+KI              
Sbjct: 332 EITIS----YGLTEASPVFTMTSVDDPFEKRVESVGKAMPHCEVKIIDPETGETLAPGNV 387

Query: 409 GEVLVRGVSVLKEYYKRPDATAEVLDANGYFHTGDAGVLDSEGHLRIIDRAKDVGRLVGG 468
           GE+  RG +V+K YYK P+ TAEV++ +G+ H+GD  V D +G+ +I+ R KD+  + GG
Sbjct: 388 GEICCRGYNVMKGYYKMPEKTAEVIEKDGWLHSGDLAVEDEDGYYKIVGRIKDM-IIRGG 446

Query: 469 AIFAPNYIENKLKFFPQIKEAVCFG 493
               P  IE  L   P I +A   G
Sbjct: 447 ENIYPREIEEFLYTMPGINDAQVVG 471