Pairwise Alignments

Query, 465 a.a., Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) from Variovorax sp. SCN45

Subject, 407 a.a., exodeoxyribonuclease VII large subunit from Methanococcus maripaludis S2

 Score =  219 bits (557), Expect = 2e-61
 Identities = 125/390 (32%), Positives = 209/390 (53%), Gaps = 25/390 (6%)

Query: 65  VRGEISGFSRASSGHCYFALKDESGQLRCAMFRRAAGLLDFSPRDGDQVEVRGRLAVYEP 124
           ++GEIS  +   SGH YF LKDE+  + C MF+     LDFSP +G  V ++G++++Y  
Sbjct: 38  IKGEISNCTLHKSGHVYFTLKDENSAIDCVMFKPYTKKLDFSPAEGMSVIIKGKVSLYTK 97

Query: 125 RGDLQLVVESLRRAGQGALFEQFMQRKARLEAEGLFDPARKRALPTMPRAVGVVTSLGAA 184
            G  Q     + + G G LF +F + K +LE+EGLF+   K+ +P  P+ +G++TS   A
Sbjct: 98  TGKYQFYCNEMEKEGLGDLFIKFKKLKEKLESEGLFNEEYKQKIPKYPKNIGIITSPTGA 157

Query: 185 ALHDVVTALRRRVPHIPVVLAPAAVQGANAPGELVRALHSLYALEPAVDVILLVRGGGSI 244
           A+ D++   R R   + +++ PA VQG +A   ++  +  L  LE  +D+I++ RGGGS+
Sbjct: 158 AIRDIIKVTRNRNSSVNLIIYPAVVQGESAAKTVISGISELNKLE-KIDLIIIARGGGSM 216

Query: 245 EDLWAFNDEALARTIVQSPVPVISGVGHETDFTIADFCADLRAPTPTAAAELVSAPRDLW 304
           EDLW FN+E+LAR I +S  PVI+G+GHETDFTI+DF +DLRA TP+ AAE+        
Sbjct: 217 EDLWCFNNESLARAIFESKKPVITGIGHETDFTISDFVSDLRAATPSNAAEIAIYNEYEL 276

Query: 305 LGALDLLDERLSDSLGGRLDVLGQRLDQAAGRLGR--PSNLVTRQQLRLAHHAQRLQYAM 362
              ++ L+  L + +   +      LD    ++ +  P + + +Q++    H  +++   
Sbjct: 277 KSMINNLERMLKNRMKTEISNRSYELDILYSKIEKNSPKSKIEKQKV----HVDKIR--- 329

Query: 363 RSKRERLAQAPRAMAADFPSKLERAVTQRHDRLERVALRWRLLDPALVLQRGYAWLTDAD 422
                          A    +++  ++    R E+        +P  VL +GY+ + D +
Sbjct: 330 ---------------AQMNHEIKNKISYEVKRFEKSYSLLNAYNPLNVLNKGYSIIQDEN 374

Query: 423 GRAVVSAKQLAPGDAVVARLADGEVDMTVS 452
            + + S   L   + V   L DG VD  ++
Sbjct: 375 EKIISSKSSLNLENDVKITLKDGTVDAHIT 404