Pairwise Alignments

Query, 465 a.a., Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) from Variovorax sp. SCN45

Subject, 448 a.a., exodeoxyribonuclease VII large subunit (RefSeq) from Shewanella sp. ANA-3

 Score =  270 bits (689), Expect = 9e-77
 Identities = 169/440 (38%), Positives = 237/440 (53%), Gaps = 26/440 (5%)

Query: 38  PGPRVWAVGALCHAVADALDARFNPVTVRGEISGFSRASSGHCYFALKDESGQLRCAMFR 97
           P   ++ V  L   V   L+ +   V + GEIS FS  SSGH Y  LKD   Q+RCAMF+
Sbjct: 4   PKNNIYTVSRLNGEVRQILEGQLGKVWLNGEISNFSAPSSGHWYLTLKDHYSQIRCAMFK 63

Query: 98  RAAGLLDFSPRDGDQVEVRGRLAVYEPRGDLQLVVESLRRAGQGALFEQFMQRKARLEAE 157
                + F P +G QV V+G ++VYEPRGD QL++ES+  AG G L +QF   K +L A+
Sbjct: 64  GRNQSVSFKPVNGQQVLVKGAISVYEPRGDYQLLIESMLPAGDGLLAQQFEALKMKLAAQ 123

Query: 158 GLFDPARKRALPTMPRAVGVVTSLGAAALHDVVTALRRRVPHIPVVLAPAAVQGANAPGE 217
           GLF    KR LP   + +GV+TS   AA+ DV+  L RR P I V++ P  VQG NA   
Sbjct: 124 GLFAADTKRQLPKNIQRIGVITSPTGAAIRDVLHVLARRDPSIEVIIYPTQVQGENADMN 183

Query: 218 LVRALHSLYALEPAVDVILLVRGGGSIEDLWAFNDEALARTIVQSPVPVISGVGHETDFT 277
           + +A+ ++      VDV+LL RGGGS+EDLW FN EALA TI  S +PV+S VGHE D T
Sbjct: 184 ICQAI-NIANQRLEVDVLLLTRGGGSLEDLWCFNSEALAHTIYNSALPVVSAVGHEVDTT 242

Query: 278 IADFCADLRAPTPTAAAELVSAPRDLWLGALDLLDERLSDSLG-------GRLDVLGQRL 330
           I+D+ AD+RAPTP+A AEL+S   D     L  +  RL  S          RL +L  RL
Sbjct: 243 ISDYVADVRAPTPSAGAELLSQDSDNKSQRLATVLSRLKQSASHYQLKQEKRLSLLEHRL 302

Query: 331 DQAAGR--LGRPSNLVTRQQLRLAHHAQRLQYAMRSKRERLA-----QAPR--------- 374
            +   +  L +        QLRL        + +  ++++LA     Q+P+         
Sbjct: 303 QRLDPKRTLQQFEQRFDEMQLRLEAALSNKLHGLSRRQQQLANRLEQQSPKHKLALETNR 362

Query: 375 --AMAADFPSKLERAVTQRHDRLERVALRWRLLDPALVLQRGYAWLTDADGRAVVSAKQL 432
              +A      ++  + Q   R+   A +   + P   L RGY+  TDA+ + + +A QL
Sbjct: 363 LSYLATRLQDAMQDTLNQSEQRITYAAHQLETVSPLATLSRGYSITTDANNQVIDNAAQL 422

Query: 433 APGDAVVARLADGEVDMTVS 452
           + GD +  RL  G+V  TV+
Sbjct: 423 SVGDKINTRLRHGQVQSTVT 442