Pairwise Alignments

Query, 286 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 537 a.a., branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  147 bits (371), Expect = 5e-40
 Identities = 96/294 (32%), Positives = 147/294 (50%), Gaps = 16/294 (5%)

Query: 5   IFDGVAYGMLLFLIGVGLSITMGLMNFVNLAHGSFAMVGGYVAAVLMNHFGLGF------ 58
           I+ G++ G +L L  +GL+IT G+M  +N+AHG   M+G Y   ++ +     F      
Sbjct: 245 IWYGLSLGSVLLLAAIGLAITFGVMGIINMAHGEMVMLGAYTTFLVQDVVRTSFPHLFEW 304

Query: 59  --GLSLAAAFVAAALVGAVLEFVFYRRLYRAHPLDQVLLSIGVVFVSIAAFTYFFGPTMQ 116
              ++L  AF+    VG  LE    R LY   PL+ +L + G+  +        FGPT +
Sbjct: 305 SLAIALPLAFLVTGAVGLALERGVIRFLY-GRPLETLLATWGISLILQQTVRTIFGPTNR 363

Query: 117 PFTLPAALDGQVSLLGMEVGRYRLFLIACGAAVLVALLLGLGKTRYGAMVRAAVDNQRVA 176
               P+ + G   L G+ +   RL++I    AV  ALL  L KT  G  +RA   N+R+A
Sbjct: 364 EVGNPSWMSGAFELGGLAITWNRLWIIVFALAVFAALLFLLKKTPMGLQMRAVTQNRRMA 423

Query: 177 GGTGIHVQRLFFLTFSLGCGLAGLGGALSLGMLGLEPSFPLKYLVYFLMVVCVGGAGTVT 236
              GI    +  LTF+LG G+AG+ G     +  + P+    Y++   MVV  GG G + 
Sbjct: 424 SSMGIRTPWVDALTFALGSGIAGIAGVALSQIDNVSPNLGQGYIIDSFMVVVFGGVGNLW 483

Query: 237 GPFIAALLVGIVDVAGKYYLPEAGA----FLIYVFMIVMLLVRPNGIVAKKGLA 286
           G  + A  +GI++   K+  P AGA     L+ V +I+ +  RP G+ A KG A
Sbjct: 484 GTLVGAFSLGILN---KFLEPYAGAVLGKILVLVLIILFIQKRPRGLFALKGRA 534