Pairwise Alignments

Query, 300 a.a., Urea ABC transporter, permease protein UrtB from Variovorax sp. SCN45

Subject, 537 a.a., branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  265 bits (678), Expect = 1e-75
 Identities = 143/295 (48%), Positives = 193/295 (65%), Gaps = 1/295 (0%)

Query: 6   AVMQVFNGVSLFTILLLMAIGLAIVFGLMGVINMAHGELMALGAYMTYLAARFFEHFAPG 65
           A   ++ G+SL ++LLL AIGLAI FG+MG+INMAHGE++ LGAY T+L         P 
Sbjct: 241 AGQNIWYGLSLGSVLLLAAIGLAITFGVMGIINMAHGEMVMLGAYTTFLVQDVVRTSFPH 300

Query: 66  FMDLYLFAAIPFAFAVTFAFGYVLERGFIRFFYDRPLDTLLATWGLSLMLQQAYRSIFGA 125
             +  L  A+P AF VT A G  LERG IRF Y RPL+TLLATWG+SL+LQQ  R+IFG 
Sbjct: 301 LFEWSLAIALPLAFLVTGAVGLALERGVIRFLYGRPLETLLATWGISLILQQTVRTIFGP 360

Query: 126 QEVSVPLASWLAGAWEPTAGIQLPLNRIFIVGLTALVATGVYLLLYRTSWGLKVRAVTQN 185
               V   SW++GA+E   G+ +  NR++I+     V   +  LL +T  GL++RAVTQN
Sbjct: 361 TNREVGNPSWMSGAFE-LGGLAITWNRLWIIVFALAVFAALLFLLKKTPMGLQMRAVTQN 419

Query: 186 RAIAGAVGIDTHRVDAMTFALGSGLAGIAGAVFTMIGSTNPGTGQLYIVDSFIVVVFGGV 245
           R +A ++GI T  VDA+TFALGSG+AGIAG   + I + +P  GQ YI+DSF+VVVFGGV
Sbjct: 420 RRMASSMGIRTPWVDALTFALGSGIAGIAGVALSQIDNVSPNLGQGYIIDSFMVVVFGGV 479

Query: 246 QSLVGTALSGFSIAQSQTWLEYLMSGSMAKATILLLVIVVLYFRPNGLFATRSRS 300
            +L GT +  FS+     +LE      + K  +L+L+I+ +  RP GLFA + R+
Sbjct: 480 GNLWGTLVGAFSLGILNKFLEPYAGAVLGKILVLVLIILFIQKRPRGLFALKGRA 534