Pairwise Alignments

Query, 300 a.a., Urea ABC transporter, permease protein UrtB from Variovorax sp. SCN45

Subject, 340 a.a., D-lactate transporter, permease component 2 (from data) from Phaeobacter inhibens DSM 17395

 Score =  149 bits (377), Expect = 7e-41
 Identities = 98/335 (29%), Positives = 164/335 (48%), Gaps = 42/335 (12%)

Query: 4   DIAVMQVFNGVSLFTILLLMAIGLAIVFGLMGVINMAHGELMALGAYMT----------- 52
           D  ++Q+ NG+   +   L+A+GL ++FG +GV+N AHG L  +GA+             
Sbjct: 2   DAILLQILNGLDKGSAYALIALGLTLIFGTLGVVNFAHGALFMIGAFCAVTVQRVLSLSF 61

Query: 53  --------------------YLAARFFEHFAPGFMDLYLFAAIPFAFAVTFAFGYVLERG 92
                               Y+ + F        +D  +  AI FA  +    GYV+ERG
Sbjct: 62  ETVDETQKDFLGNPLKVKTPYVESWFGPEVGGAIIDWAVPLAILFAIPIMIGVGYVMERG 121

Query: 93  FIRFFYDRP-LDTLLATWGLSLMLQQAYRSIFGAQEVSVPLASWLAGAWEPTAGIQL--- 148
            I+ FY RP  D +L T+GL+++LQ+  +  +GA  +  P    L G     + I +   
Sbjct: 122 LIKHFYKRPHADQILVTFGLAIVLQEVVKYFYGANPIQTPAPDALNGVVNLGSIIGMDIV 181

Query: 149 -PLNRIFIVGLTALVATGVYLLLYRTSWGLKVRAVTQNRAIAGAVGIDTHRVDAMTFALG 207
            P+ R+       ++  G++  L  T++G+ VRA   +R   G +GI+  R   + F + 
Sbjct: 182 YPVWRVVYFFFAVVIIGGIFSFLQFTTFGMVVRAGMADRETVGLLGINIDRRFTIMFGIA 241

Query: 208 SGLAGIAGAVFTMIGSTNPGTGQLYIVDSFIVVVFGGVQSLVGTALSGFSIA-----QSQ 262
           + +AG+AG ++T I S N   G  ++V SF+VVV GG+ SL G  L+GF +       S 
Sbjct: 242 AAVAGLAGVMYTPINSPNYHMGMDFLVLSFVVVVVGGMGSLPGAVLAGFLLGVLESFASM 301

Query: 263 TWLEYLMSGSMAKATILLLVIVVLYFRPNGLFATR 297
             ++ L+ G + +  I ++ I++L  RP GL   +
Sbjct: 302 NEIKSLIPG-IDQIIIYVVAIIILLTRPRGLMGRK 335