Pairwise Alignments

Query, 351 a.a., Urea ABC transporter, permease protein UrtC from Variovorax sp. SCN45

Subject, 333 a.a., branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  106 bits (264), Expect = 1e-27
 Identities = 95/349 (27%), Positives = 156/349 (44%), Gaps = 34/349 (9%)

Query: 5   LSPQRRS---DLAGMAAVLLLLAVVLPATLDPFRLNLVSKYLAFAFVAVGVVLTWGYGGV 61
           LS  RR    DLAG+A +L+L  +     L P  L L+++  A A + + + L  GY GV
Sbjct: 11  LSAGRRGLGRDLAGLAVILVLAGIGY--LLFPNNLALLTRITAIALLVLSLDLVTGYCGV 68

Query: 62  LSLGQGMFFGLGGYMMAMFLKLEASAPELPDFMVWSSVDQLPSWWIPFHSLGWTIVGILV 121
            +LG    FG G Y         A+      F +       P   +    LG  + G+  
Sbjct: 69  ATLGHAALFGSGAY---------AAGIAAVHFGITD-----PLLMLAAGILGGALAGLAC 114

Query: 122 VPAVLAYVFSYAIFKRRVSGVYFAIVTLSLALTLTVVVIGQQGDTGGANGITDFRT--LL 179
              +L           R  G+   +++++L              TGG++G+       L+
Sbjct: 115 GVVIL-----------RAHGLPQLVLSIALIHLFHEFANKASSWTGGSDGLAGISPDPLI 163

Query: 180 GLDIAGDDAKRTMYFVEVLAIALVMAVSLVIVRSRFGKILIAIRDREDRVRFSGYNTAHM 239
           GL  A D   RT Y   V+ +A+V  +  ++VRS FG +   IR+   R+R  G +    
Sbjct: 164 GL-FAFDLWGRTAYVFGVVLLAIVFVLLRLVVRSPFGMLCRGIREDPTRIRAMGASPTIA 222

Query: 240 KAFVFAVAAVLSSIGGAFYSLQVGLIAPGVIGVVASVEMVIYAAVGGRLSIPGAVIGALL 299
              ++ ++  ++ +GGA  ++   ++    +    S E ++   +GG  S+ GA+ G ++
Sbjct: 223 LLKMYVISGAVAGVGGALNAVSTQVVGLDSLSFTLSAESLVMLVLGGTGSLFGALTGTIV 282

Query: 300 IGFLKSYLSETFPEGWLYFLGAVFILVVWAMPDGLAGLGARLL-RRRGA 347
             F +  +S   P  WL  +GA+ I VV   P GL G  A +L RRRGA
Sbjct: 283 FMFFEDLVSTANPFHWLTMVGALLIAVVLFAPKGLYGTVAEVLARRRGA 331