Pairwise Alignments

Query, 300 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 306 a.a., transcriptional regulator GcvA from Vibrio cholerae E7946 ATCC 55056

 Score =  172 bits (437), Expect = 7e-48
 Identities = 107/299 (35%), Positives = 160/299 (53%), Gaps = 7/299 (2%)

Query: 1   MRRKIPPLQTLVCFDAAARHESYTRAAQELALTQSAVSRQIGTLEAFLGVALFRRTRHGV 60
           M R++PPL +L  F+AAARH S+TRAA+EL +TQ+AVS QI  LE FLG+ LFRR    +
Sbjct: 1   MSRRLPPLNSLKVFEAAARHLSFTRAAEELFVTQAAVSHQIKALEEFLGLKLFRRRNRSL 60

Query: 61  ALTASGAAYARQTAKRLEAMERDTLDAMAHQGEGGSLSLAAVPTFATRWLMPRLKGFAAL 120
            LT  G +Y         ++   T D +  + E G+L+++  P+FA +WL+PRL  F   
Sbjct: 61  LLTEEGQSYFLDIKDIFSSLAEAT-DKLLERSEKGALTISLPPSFAIQWLVPRLADFNQQ 119

Query: 121 QPDVVVHIETRTRPFLFADAEFDAALYAGTPAQVENWAGTHALLLMHEDVVPVCSPALLP 180
           +PD+ V I+           + D A+Y G      +W G  A  L  E ++P+CSPALL 
Sbjct: 120 EPDIDVRIKAVDMDEGSLTDDVDVAIYYGR----GSWPGLRADKLYQEFLIPLCSPALLL 175

Query: 181 RGKAVTPAA-IAKMPLLQQSTRPDGWRQWFDAQQIDAPNARGGPRYELFSILAAAASHGL 239
             K +   + +A   LL  ++R D W+Q+     +D  N   GP +   +++  AA+HG 
Sbjct: 176 GNKPMEKLSDLAYHTLLHDTSRKD-WKQFAKENGLDNVNVNHGPIFSHSTMVLQAAAHGQ 234

Query: 240 GVALMPTMLVADELARGELVVACARPLSGERNYYLVTPERADQRPLLKFFSDWLLGQAR 298
           GVAL   +L   E+  G L+      L     +Y+V  E+      +  F DW+L +AR
Sbjct: 235 GVALGNNVLAQPEIDAGRLIAPFDEVLMTNNAFYVVCHEKQADMGRIATFRDWMLKKAR 293