Pairwise Alignments

Query, 419 a.a., Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) from Variovorax sp. SCN45

Subject, 335 a.a., isocitrate dehydrogenase, NAD-dependent (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  161 bits (408), Expect = 2e-44
 Identities = 111/345 (32%), Positives = 164/345 (47%), Gaps = 53/345 (15%)

Query: 32  IPFIEGDGTGLDITPVMLKVVDAAVAKAYGGKKKIHWMEVYAGEKSTKVYGPDVWLPEET 91
           I  I GDG G  I    LK++D A            +    AG  + +  G    LP+ T
Sbjct: 6   ITVIPGDGIGPSIIDSALKILDKAGCD-------FEYEFADAGLAALEKQGE--LLPQRT 56

Query: 92  LQAVRDYVISIKGPLTTPVGGGIRSLNVALRQELDLYVCLRPIRYFDGVPSPVREPHKTN 151
           L+ +    I++KGPLTTPVG G  S+NV LR++  LY  +RP+  F G  +        +
Sbjct: 57  LELIEKNRITLKGPLTTPVGEGFTSINVTLRKKFGLYANVRPVLSFKGTQARYEN---ID 113

Query: 152 MVIFRENSEDIYAGIEFEAESDKAKKLIKFLQDEMGVKKIRFPDTSGIGVKPVSIEGTER 211
           ++  REN+E +Y+G   +   D                      ++      V+ +G E+
Sbjct: 114 IITVRENTEGMYSGHGQKVSED---------------------GSTAEATSIVTRQGAEQ 152

Query: 212 LVRKALQYAIDNDKSSVTIVHKGNIMKFTEGGFRDWAYNLAAKEFGAELVDGGPWMKFKN 271
           +   A + A    +  VTIVHK NIMK T G F   A  ++ +                 
Sbjct: 153 IATFAYELARKESRKKVTIVHKANIMKSTSGLFLKVAREVSLRY---------------- 196

Query: 272 PRTGKDITVKDSIADAFLQQILLRPAEYSVIATLNLNGDYVSDALAAQVGGIGIAPGANL 331
                DI  ++ I DA   ++++ P  + VI T NL GD +SD  A  VGG+G+APGAN+
Sbjct: 197 ----PDIKTEEMIVDATCMKLVMNPENFDVIVTTNLFGDILSDLCAGLVGGLGMAPGANI 252

Query: 332 SDTVAMFEATHGTAPKYAGKDYVNPGSEILSAEMMLRHMGWTEAA 376
               A+FEA HG+AP  AGK+  NP S IL++  ML ++G  + A
Sbjct: 253 GRDAAIFEAVHGSAPDIAGKNLANPTSVILASIQMLEYLGMADKA 297