Pairwise Alignments

Query, 256 a.a., Alkanesulfonates transport system permease protein from Variovorax sp. SCN45

Subject, 285 a.a., Binding-protein-dependent transport systems inner membrane component from Pseudomonas syringae pv. syringae B728a

 Score =  114 bits (284), Expect = 3e-30
 Identities = 74/244 (30%), Positives = 124/244 (50%), Gaps = 6/244 (2%)

Query: 8   RWARPWVV-----PLVLIGAFEWYARRASALGSDSLAPPSAAARAFVGAAMDGSLWQATG 62
           RW  P  V     PLVL+  +E  A +   L    +A PS          + G L     
Sbjct: 31  RWQVPGFVLRLLSPLVLLLLWE-LASQTGLLPVRVIAAPSQIGGTLWSMIVSGELAHHLW 89

Query: 63  FTLGTAALGLLLGAVLGIALGLVLGLSRRAAQLGSMSIEVLRPVPSVALIPLAMLGFGFG 122
            +L  A LGL +G  +G+   LV GLSRR   +    ++ LR +PS+AL+PL +L FG G
Sbjct: 90  VSLQRALLGLSIGVSIGVVAALVTGLSRRGEIVLDSPMQRLRTIPSLALVPLFILWFGIG 149

Query: 123 VRMELAIVAFATFWPLLVLVQAAVQQVEPRLLEVSRVLGLSARERAFKIVLPAIVPRLFV 182
              ++A++   T +P+ + + + ++ ++P+L+E +  LGLS RE  + ++LP  +P  FV
Sbjct: 150 EFTKVALIVMGTTFPVYLNLFSGIRNIDPKLIEAANTLGLSRRELIWHVILPGSLPAFFV 209

Query: 183 ALRLGVAVALVVAVTVEIAANPNGMGYAMMIAQQSFDPALMLAWLGWIGVVGFAVNAGML 242
            LR  + ++ +  V VE      G+GY    A+      +++  L    V+G  ++A + 
Sbjct: 210 GLRYSLGISWLALVFVEQINTTAGIGYLASDARDFMRTDVIVICLLIYSVLGLVIDAIIR 269

Query: 243 LLQR 246
            L+R
Sbjct: 270 TLER 273