Pairwise Alignments

Query, 773 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA from Variovorax sp. SCN45

Subject, 918 a.a., Clp protease ClpC from Pseudomonas fluorescens FW300-N2C3

 Score =  518 bits (1333), Expect = e-151
 Identities = 326/834 (39%), Positives = 469/834 (56%), Gaps = 94/834 (11%)

Query: 3   AQELEVSLHMAFVEARQQRHEFITVEHLLLALLDNPSAAEVLRACSANVDDLRASLTNFI 62
           +Q LE+ L  A  +A +     +  EHLL  L D    A +L+    + DD++  +    
Sbjct: 93  SQTLEI-LQRAGEKAHELNRSDLDTEHLLYVLADTDVGAALLKELKLSADDIKGYIDQHA 151

Query: 63  KDNTPQVAGTDDVDTQPTLGFQRVIQRAIMHVQSTGNGKKEVTGANVLVAIFGEKDSHAV 122
           +  T +V+  D +   P L  ++    A    +  G+    V   ++L+ +    +S A 
Sbjct: 152 QRGTAEVS-VDQMTISPRL--KKAFNFAFQASRDLGHSY--VGPEHLLIGLASVPESIAG 206

Query: 123 YYLHQQGVTRLDVVNFIAHGIKKSDPPEAVKGAGEAPSNEGEEGGGERNEKASP-LEQFT 181
             L + GVT                 PEA++        +G E G       +P L++F 
Sbjct: 207 TLLKKYGVT-----------------PEALRQKVVKVVGKGAEDGRVDTPTGTPTLDKFG 249

Query: 182 QNLNQLAKDGKIDPLIGREYEVERVIQILCRRRKNNPLLVGEAGVGKTAIAEGLAWRITQ 241
           ++L  LA++GK+DP++GR  E+E  I++L RRRKNNP+L+GE GVGKTAI EGLA RI +
Sbjct: 250 RDLTSLAREGKLDPVLGRAQEIENTIEVLARRRKNNPVLIGEPGVGKTAIVEGLAQRIVK 309

Query: 242 GDVPEILAESNVFSLDMGALLAGTKYRGDFEQRLKGVLKSLKDKPNA-ILFIDEIHTLIG 300
           GDVPEIL    +  +++ +++AG+KYRG+FE+R K +L  +  K +  ILFIDE+HT++G
Sbjct: 310 GDVPEILRGRRLVEVNLNSMVAGSKYRGEFEERAKQLLDEVAAKSSELILFIDELHTIVG 369

Query: 301 AG-AASGGTLDASNLLKPALSSGQLKCIGATTFTEYRGIFEKDAALSRRFQKVDVVEPSV 359
           AG     G LD +N+LKPAL+ G+L  IGATT  EY+   EKDAAL RRFQ V + EP+V
Sbjct: 370 AGQGGEEGGLDIANVLKPALARGELSLIGATTLNEYQKHIEKDAALERRFQPVLIAEPTV 429

Query: 360 QETVDILKGLKSRFEEHHGVKYAVAALQAAAELSAKYINDRHLPDKAIDVIDEAGAAQRI 419
           ++T+ IL+GL+ + E HH V +A  A  AAAELS +YI  R LPDKAID+ID+A A  RI
Sbjct: 430 EQTIIILRGLRDKLEAHHQVTFADEAFVAAAELSDRYITSRFLPDKAIDLIDQAAARVRI 489

Query: 420 LPPSK---------------------------------------------------RKKT 428
              S+                                                    +KT
Sbjct: 490 SSSSRPAGIQELEAEITQLKREQDYASSRKRFDESKGFEERIGQKQAQLGEETEAWERKT 549

Query: 429 ISKT------EVEEIVAKIARIPPANVSNDDRSKLQTIERDLKSVVFGQDKALEVLASAV 482
            S+T       + E+++++  IP   ++  +R KL  +E  L+  + GQ+ A+  ++ AV
Sbjct: 550 GSETLEVTLESIAEVLSRLTGIPVTELTQAERQKLLNMEDTLRDRLVGQEDAVLAVSDAV 609

Query: 483 KMARSGLGKGDKPIGSFLFSGPTGVGKTEAAKQLA-YIMGIE--LIRFDMSEYMERHAVS 539
           +++R+GLG+ ++PI +FLF GPTGVGKTE AK LA  + G E  +IR DMSEYMERHAV+
Sbjct: 610 RLSRAGLGQANRPIATFLFLGPTGVGKTELAKALAETVFGDEQSIIRIDMSEYMERHAVA 669

Query: 540 RLIGAPPGYVGFDQGGLLTEAVTKKPHAVLLLDEIEKAHPDIFNVLLQVMDHGTLTDNNG 599
           RLIGAPPGYVG+D+GG LTE V ++P++V+LLDEIEKAHPD+ NVLLQV D G LTD  G
Sbjct: 670 RLIGAPPGYVGYDEGGQLTERVRRRPYSVILLDEIEKAHPDVSNVLLQVFDDGRLTDGKG 729

Query: 600 RKADFRNVIIIMTTNAGA----ETMNKATIGFTNPRQAGDE-MGDIKRLFSPEFRNRLDA 654
           R  DF N III T+N G+    E + +        +   DE MG +K  F PEF NR+D 
Sbjct: 730 RVVDFSNTIIIATSNLGSPVIMENLERPEDARLTDKALRDELMGVLKGHFRPEFLNRIDD 789

Query: 655 IVNFKALDENIILRVVDKFLLQLETQLSEKKVEVTFSDKLRKHLAKKGFDPLMGARPMQR 714
           I+ F AL  + I  +V   L ++    + + + V     L  +LA  G+ P  GAR ++R
Sbjct: 790 IIVFHALTRDNIRSIVSIQLDRVIRTAAAQNITVKIDGSLIDYLADVGYQPEFGARELKR 849

Query: 715 LIQDTIRRALADELLFGRLTDGGRLEVDLD-DKDEVLLD--IQPLPKKEGKSKP 765
            I+  +   LA E+L G+L  G  +E+  D  + EV+       +PK  G S P
Sbjct: 850 QIRQAVETRLAKEMLAGKLEAGDSVELGYDKGRGEVIFSKVAADVPKVSGDSSP 903