Pairwise Alignments

Query, 773 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA from Variovorax sp. SCN45

Subject, 756 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA from Vibrio cholerae E7946 ATCC 55056

 Score =  912 bits (2357), Expect = 0.0
 Identities = 460/747 (61%), Positives = 584/747 (78%), Gaps = 9/747 (1%)

Query: 1   MIAQELEVSLHMAFVEARQQRHEFITVEHLLLALLDNPSAAEVLRACSANVDDLRASLTN 60
           M+ +ELE SL+ AF  AR +RHEF+TVEHLLLALL+N +A E L AC A++D LR  L  
Sbjct: 1   MLNKELESSLNGAFARARDKRHEFMTVEHLLLALLENDAAREALLACQADIDVLRRELDT 60

Query: 61  FIKDNTPQVAGTDDV-DTQPTLGFQRVIQRAIMHVQSTGNGKKEVTGANVLVAIFGEKDS 119
           FI   TP +   D+  +TQPTL FQRV+QRA+ HVQS+G  + EVTGANVLVAIF E++S
Sbjct: 61  FIDQTTPLIPKNDETRETQPTLSFQRVLQRAVFHVQSSG--RSEVTGANVLVAIFSEQES 118

Query: 120 HAVYYLHQQGVTRLDVVNFIAHGIKK-SDPPEAVKGAGEAPSNEGEEGGGERNEKASPLE 178
           HA Y L +  ++RLD+VNFI+HGI K S+  E         S+  EE   +       LE
Sbjct: 119 HAAYLLKKNDISRLDIVNFISHGITKASNHSEDSSSDSFGSSDTSEEVSADER-----LE 173

Query: 179 QFTQNLNQLAKDGKIDPLIGREYEVERVIQILCRRRKNNPLLVGEAGVGKTAIAEGLAWR 238
            F  NLNQLAK G+IDPLIGR+ E+ER IQ+LCRRRKNNPLLVGEAGVGKTAIAEGLAWR
Sbjct: 174 SFATNLNQLAKQGQIDPLIGRDKELERTIQVLCRRRKNNPLLVGEAGVGKTAIAEGLAWR 233

Query: 239 ITQGDVPEILAESNVFSLDMGALLAGTKYRGDFEQRLKGVLKSLKDKPNAILFIDEIHTL 298
           I +G+VPE++  S ++SLD+G+LLAGTKYRGDFE+R K +LK L+ + +AILFIDEIHT+
Sbjct: 234 IVEGNVPEVIQRSVIYSLDIGSLLAGTKYRGDFEKRFKSILKQLEKEKDAILFIDEIHTI 293

Query: 299 IGAGAASGGTLDASNLLKPALSSGQLKCIGATTFTEYRGIFEKDAALSRRFQKVDVVEPS 358
           IGAGAASGG +DA+NL+KP LSSG+L+CIG+TT+ EY  IFEK+ ALSRRFQK+D+VEPS
Sbjct: 294 IGAGAASGGQVDAANLIKPLLSSGKLRCIGSTTYQEYSNIFEKERALSRRFQKIDIVEPS 353

Query: 359 VQETVDILKGLKSRFEEHHGVKYAVAALQAAAELSAKYINDRHLPDKAIDVIDEAGAAQR 418
           + +T  IL GLK+++E HH V+Y   AL+AA ELSAKYIN+RHLPDKAIDVIDEAGA  R
Sbjct: 354 LDDTTKILMGLKTKYEAHHDVRYTNKALRAAVELSAKYINERHLPDKAIDVIDEAGARAR 413

Query: 419 ILPPSKRKKTISKTEVEEIVAKIARIPPANVSNDDRSKLQTIERDLKSVVFGQDKALEVL 478
           ++P S+RKKT+   E+E +VAK+ARIP  +VS+ D+  L+ +++ +K +VFGQD A++VL
Sbjct: 414 LMPASRRKKTVGVAEIESMVAKMARIPEKSVSSSDKDILKNLDQKMKMLVFGQDAAIDVL 473

Query: 479 ASAVKMARSGLGKGDKPIGSFLFSGPTGVGKTEAAKQLAYIMGIELIRFDMSEYMERHAV 538
             A+K+ R+GLG   KP+GSFLF+GPTGVGKTE   QL+ ++GIEL+RFDMSEY ERH+V
Sbjct: 474 TEAIKLTRAGLGAEHKPVGSFLFAGPTGVGKTEVTLQLSKLLGIELLRFDMSEYGERHSV 533

Query: 539 SRLIGAPPGYVGFDQGGLLTEAVTKKPHAVLLLDEIEKAHPDIFNVLLQVMDHGTLTDNN 598
           SRLIGAPPGYVG+DQGGLLT+AV K PH+V+LLDEIEKAHPDIFN+LLQVMD+GTLTDNN
Sbjct: 534 SRLIGAPPGYVGYDQGGLLTDAVIKHPHSVVLLDEIEKAHPDIFNLLLQVMDNGTLTDNN 593

Query: 599 GRKADFRNVIIIMTTNAGAETMNKATIGFTNPRQAGDEMGDIKRLFSPEFRNRLDAIVNF 658
           GRKADFRNVI++MTTNAG     K +IG      + D M +IK++F+PEFRNRLD I+ F
Sbjct: 594 GRKADFRNVILVMTTNAGVAETVKKSIGLIQQDNSHDAMSEIKKVFTPEFRNRLDHIIWF 653

Query: 659 KALDENIILRVVDKFLLQLETQLSEKKVEVTFSDKLRKHLAKKGFDPLMGARPMQRLIQD 718
            +LDE +I +VVDKF+++L+ QL  + V +  S+  R  LA KG+D  MGARPM R+IQ+
Sbjct: 654 NSLDERVIHQVVDKFIVELQAQLDARGVSLEVSEDARHWLAVKGYDREMGARPMGRVIQE 713

Query: 719 TIRRALADELLFGRLTDGGRLEVDLDD 745
            +++ LA+ELLFG L DGG ++V L D
Sbjct: 714 QLKKPLANELLFGSLVDGGTVKVTLSD 740