Pairwise Alignments

Query, 268 a.a., Uncharacterized metal-dependent hydrolase YcfH from Variovorax sp. SCN45

Subject, 251 a.a., YchF/TatD family DNA exonuclease from Methanococcus maripaludis S2

 Score = 85.9 bits (211), Expect = 8e-22
 Identities = 66/267 (24%), Positives = 126/267 (47%), Gaps = 28/267 (10%)

Query: 2   FTDSHCHLTFPEFADQMPQIRAAMAAAQVDRALCICTKLEEFDDVQALAASYDNFWASVG 61
           + DSHCH+           I       +V + +   T L        L   Y   + ++G
Sbjct: 8   YIDSHCHVEDKSLNKYREDIVKRAFEKKV-QMVTSGTNLGSCRRAVELKEKY-GIYVTLG 65

Query: 62  VHPDNEDIAEPTVEDLVRL--SARPRVVAIGETGLDYYQMEERKGGRSISDMEWQRDRFR 119
            HP   +  +  +E +     S    ++A+GE GLD+             ++E Q + F+
Sbjct: 66  YHPGRVNADDNAIEKVYNFIRSKEKEILAVGEIGLDF----------DAENIERQENIFK 115

Query: 120 VHIRAAQQTRKPLVIHTREASADTLAILKEEGEDGAGKAAGGVFHCFTETAEVARAALDL 179
             I  +++  KP+VIH R     +  ILK +           ++HC++ + E+A+  +  
Sbjct: 116 KFINLSKEVNKPVVIHARGMEERSYDILKND--------VISMYHCYSGSLELAKELIKN 167

Query: 180 GFYISFSGILTFKKAQDLRDVAAFVPLDRMLIETDSPYLAPVPYRGKTNNPSYVPYVAQQ 239
           G +IS+S ++ F  ++  +++   + L+ +++ETDSPYL+P+  +G+ N P  V  V + 
Sbjct: 168 GNFISYSTLVCF--SEHHKNLVKNLGLENVVVETDSPYLSPI--KGEKNEPKNVINVIET 223

Query: 240 IAELRK--LPVEAVAKATSDNFETLFR 264
           I EL+K    ++ + K   +N + L+R
Sbjct: 224 IWELKKDEYSMDEITKIIYNNTKRLYR 250