Pairwise Alignments

Query, 390 a.a., Benzoate ABC transporter, substrate-binding protein from Variovorax sp. SCN45

Subject, 393 a.a., amino acid/amide ABC transporter substrate-binding protein, HAAT family from Pseudomonas syringae pv. syringae B728a

 Score = 82.0 bits (201), Expect = 3e-20
 Identities = 87/358 (24%), Positives = 144/358 (40%), Gaps = 20/358 (5%)

Query: 8   LALTAIAFAALASAAGAQGTGKLKVGLMLPYSGTYTALGVAIENGFKLYVDE--QGGKLA 65
           L L AI+    A    AQ    +KVG++   +GT      ++ +  KL ++E    G + 
Sbjct: 13  LLLGAISLLPFALIGQAQADEAVKVGIIHSLTGTMAISEASVVDAEKLAIEEINASGGVM 72

Query: 66  GREIEYFKVDDESDPAKATDNVNKLIKRDNVDVIVGTVHSGVAMAMAKAAKESGTVLIVP 125
           G+ IE    D  SD     +   KL++ D+V V  G   S    A+    + +  +L  P
Sbjct: 73  GKTIEPIVEDGASDWPTFAEKARKLLENDHVAVTFGAFTSASRKAVLPVFERNKGLLYYP 132

Query: 126 NAGADAVTGPMCAPNIFRSSFSNWQPAYAMGEVAAKQQGKKKAMTITWKYAAGDESVNGF 185
                    P     I+  + ++ Q   A+  + A    K K++ +         + N  
Sbjct: 133 TFYEGLEKSPAI---IYTGAEASQQTLAAVTWLMAN---KGKSVYLVGSDYIWPRTTNKL 186

Query: 186 -KEGFEKNGGKVDKQLTLPFPNVEFQALLTEIAAAKPDAVYAFFAGGGAVKFVKDYQAAG 244
            +    K GG +  +  LP   +EF +++ +I AAKPD V +   GG  V F K  +AAG
Sbjct: 187 ARASVTKQGGSIVGEDYLPLGAIEFSSVINKIKAAKPDIVLSTIVGGSNVAFYKQLKAAG 246

Query: 245 LNKT-IPLYGPGFLTDGTLDAQGESAQGMLTTLHYADGLNTPRDNAFRTAYAKSFKLQPD 303
           ++ +   L G     +       E+  G LT + Y   L  P +  F     ++FK +  
Sbjct: 247 IDSSNQTLMGLAITEEEVTGIGAENLVGFLTCMSYFQSLKNPVNEKF----VQAFKTRYG 302

Query: 304 VYAVQGYDAAQMLGVGLNATKGDISKKAEF-----AAAVEKAKIDSPRGAFTVSKSHN 356
              V G D        +   K  + K   F      AA  +  +D+P G   V K ++
Sbjct: 303 QQRVVG-DPMAAAYTAVYLWKKAVEKAGSFEVPKVIAASSEMTLDAPEGEIKVHKDNH 359