Pairwise Alignments
Query, 290 a.a., Benzoate ABC transporter, permease protein 1 from Variovorax sp. SCN45
Subject, 534 a.a., urea ABC transporter permease subunit UrtB from Rhodopseudomonas palustris CGA009
Score = 145 bits (367), Expect = 1e-39
Identities = 92/278 (33%), Positives = 146/278 (52%), Gaps = 11/278 (3%)
Query: 17 GLLLFLVASGLTLIFGIMGVINLAHGSFYMIGAYMAFSLAP--------LFGDQFLLMLV 68
G +L L A GL + FG+MGVIN+AHG M+GAY F + LF L+ +
Sbjct: 249 GSVLLLAAIGLAITFGVMGVINMAHGEMVMLGAYTTFVVQEAIRTRYPALFDYSLLIAVP 308
Query: 69 AGVVLAAVFGYLLEWAFFSYLYQRDHLQQVLMTYGLILVFEELRSILVGNDVHGVKVPAW 128
++A G L+E +LY R L+ +L T+GL L+ ++ L G V P+W
Sbjct: 309 LAFLVAGAVGVLIERTVIRFLYGRP-LETLLATWGLSLILQQAVRTLFGPTNREVGNPSW 367
Query: 129 LDGSFALGSVMSYPWYRLFASAACIVLAVGLYWVVNRTRLGMMIRAGASNRDMVRGLGID 188
+ G+F LG M+ + RL+ + + L ++ T LG+ +RA NR M +GI
Sbjct: 368 MSGAFELGE-MTITYNRLWILCFTLAVFALLLAMLRYTSLGLEMRAVTQNRRMAASMGIA 426
Query: 189 VKRLYRIVFAAGVALAALAGMIAAPMSSVYPNMGASVLIICFVLVVIGGIGSITGALVAS 248
R+ + F G +A +AG+ + + +V PN+G S +I F++VV GG+G++ G LV +
Sbjct: 427 TSRVDALTFGLGSGIAGIAGVALSQIDNVSPNLGQSYIIDSFMVVVFGGVGNLWGTLVGA 486
Query: 249 LLVGFVDTF-GKVFFADLSGIGIYLLMAIVLIWKPEGL 285
+G + F V A L I I +L+ + + +P GL
Sbjct: 487 FSLGIANKFLEPVAGAVLGKIAILVLIILFIQKRPRGL 524
Score = 25.8 bits (55), Expect = 0.002
Identities = 31/146 (21%), Positives = 60/146 (41%), Gaps = 24/146 (16%)
Query: 112 RSILVGNDVHGVKVPAWLDGSFALGSVMSYPWYRLFASAACIVLAVGL------YWVVNR 165
+S V + + G K A ++ + A+ S++ WY L + ++ A+GL V+N
Sbjct: 214 QSAAVASGIAGAK--AAIERNLAIWSMVQNAWYGLSLGSVLLLAAIGLAITFGVMGVINM 271
Query: 166 TRLGMMIRAGASNRDMVR-------------GLGIDVKRLYRIVFAAGVAL--AALAGMI 210
G M+ GA +V+ L I V + + A GV + + +
Sbjct: 272 AH-GEMVMLGAYTTFVVQEAIRTRYPALFDYSLLIAVPLAFLVAGAVGVLIERTVIRFLY 330
Query: 211 AAPMSSVYPNMGASVLIICFVLVVIG 236
P+ ++ G S+++ V + G
Sbjct: 331 GRPLETLLATWGLSLILQQAVRTLFG 356