Pairwise Alignments

Query, 292 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

Subject, 303 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 90.9 bits (224), Expect = 3e-23
 Identities = 73/246 (29%), Positives = 117/246 (47%), Gaps = 19/246 (7%)

Query: 61  RGHVKGAMTRG---RRVLP--------FEAHAGGMFIFEQGYEVDRACWSGHVEEMIAVE 109
           RG++ G    G   RR++         FE +A  +  F   Y  D    SG  + M+ +E
Sbjct: 56  RGYLLGLSAAGGHSRRIIKEHHSTVHDFEQNAVYLRNFADDYCADL---SGSFDFML-LE 111

Query: 110 IRPEALRSLMPESD--GALHLQTHLSTTDATLSALAIAMRDEVERGCSSGRMHAQGLSMA 167
           I   AL  +   +D      L+   +  D  L  +  A+   V+       +    LS+A
Sbjct: 112 INHNALERIADAADLRSVSELRPVAAHADPVLGGMLGALFATVDGSADRSALFVDQLSIA 171

Query: 168 LASYLQNRYG-ATGSARRPRGRLSQTDLRKVYDWVMQHLAEDFGIDELAAELHLSAVHFT 226
           +  ++  +YG   G+      RLS     ++ D V   L  +  +++LA+  +LS   F 
Sbjct: 172 IGVHVVQQYGNGRGNVAASGRRLSSRCQARIKDLVQSQLNGELTVEQLASACNLSQATFL 231

Query: 227 RLFRASTGATPYRYVMEQRVRHALSLLGGNQS-LAEIAQAVGFSSQAHFTQVFRQMVGTT 285
           R FR + G TP+R++ +QR+  A+ LL  +Q+ L+EIA   GFS Q+HFT+ F Q +G T
Sbjct: 232 RAFRETMGKTPHRWLQQQRIEKAVDLLQFSQTQLSEIASVCGFSDQSHFTRAFVQAMGAT 291

Query: 286 PARARR 291
           P   RR
Sbjct: 292 PGAWRR 297