Pairwise Alignments

Query, 641 a.a., Transcriptional activator of acetoin dehydrogenase operon AcoR from Variovorax sp. SCN45

Subject, 616 a.a., sigma-54 dependent transcriptional regulator from Pseudomonas fluorescens FW300-N1B4

 Score =  308 bits (789), Expect = 5e-88
 Identities = 216/629 (34%), Positives = 316/629 (50%), Gaps = 28/629 (4%)

Query: 19  AALADPTQ--SLVHKSWARCVRDHGLDPSKPTPARILPAQEVRAHQQQLEHFLRAARAGM 76
           AA A P    +++  SW+RC R  GLD         LPA  +    +     ++     +
Sbjct: 2   AAPAPPLSHDAIIQDSWSRC-RAFGLDHQSAPAFDQLPADGIAQLLESQHSLVQTTHQEV 60

Query: 77  EDIYRRV-ADLGYMVLLTDAEGITVDYIGNPAWDDQLRKAGLYLGADWNEAHAGTCGVGT 135
              Y  + ++   +++L D +G  +   G   + +     G   GA W E  +GT  +GT
Sbjct: 61  LPYYENILSNSNCLIMLADNQGQVLTSWGTQRFIEPSLTRGFSAGASWMERCSGTNAIGT 120

Query: 136 CLVERQPMTCHQTEHFDATHIALTCTTAPLFDHSGKLTAILDVSALRSPEAKESQHLVRH 195
            L   Q +     EHF   +  +T + AP+FD   K+ A+LDVS   S       H +  
Sbjct: 121 ALACEQAVHIEHDEHFLKANRFMTGSAAPIFDAERKVIAVLDVS---SDSYLPPSHTLG- 176

Query: 196 LVSMYARMIEDADFLRNFRG-HWILRLGSAFGLVDVAGEVMLAFDDGGTLAGANGGARQA 254
           +V M ++ +E+   L  F G H+ L   +    +D     +L FD+ G +  AN  A   
Sbjct: 177 MVKMMSQTVENRLILNLFHGQHFQLTFNTGLNNLDSQWAGLLIFDETGQVLSANRRADNL 236

Query: 255 FAGHALSGAVSELLHMPMDAIWRIGNGGAISPLMPFAHTVLLPGGGEYHASLIAPRSRRA 314
                   +V  L  + +  +    +G      +PFA  +   G   +   L  P+    
Sbjct: 237 LGISLSRVSVESLFKVSLLELLNQPDG------LPFA--LQASGRNRFQCLLKRPKQAPI 288

Query: 315 QAPA-TAAPSARPSDRLP---PLERIAGDDPAMQKLLAQARRLVDRGIHVLVEGETGSGK 370
           QA   +   SA P+   P    L  +   D  ++K + QA RL+++ I +L+ GETG GK
Sbjct: 289 QARLFSEIKSAEPTAPAPIAISLNTLHFGDSRVEKAVRQAERLLEKDIPLLIHGETGVGK 348

Query: 371 EVLARALHSASSRAAMPFVAVNCAAIPDSLIESELFGYTPGSFTGGRAKGMKGLIAQADR 430
           EV  +ALH ASSR+  PF+AVNCAAIP  L+ESELFGY  G+FTG   KG  GLI +AD+
Sbjct: 349 EVFVKALHQASSRSKQPFIAVNCAAIPAELVESELFGYEKGAFTGANQKGSIGLIRKADK 408

Query: 431 GTLFLDEIGDMPMALQTRLLRVLSEGEVLPLGAESPQRVDIAVVAATHRHLPGLVASGRF 490
           GTLFLDEIGDMP+  Q RLLRVL E  V P+G+     VDI +++AT+R L   V  GRF
Sbjct: 409 GTLFLDEIGDMPLPTQARLLRVLQERCVQPVGSSELFPVDIRIISATNRSLREQVQLGRF 468

Query: 491 REDLYYRLCGAVLKLPPLRARGDMRYLIEGMFNEEAAAMPSP-ARLSEEAMQRLLAHDWP 549
           REDLYYR+ G  L+LPPLR R D   L + ++ +     PS  A LS E M+    H WP
Sbjct: 469 REDLYYRIGGLTLELPPLRERSDKEALFKRLWEQHRE--PSQWAGLSREVMELFSRHPWP 526

Query: 550 GNLRELRNALRLALALCTGASVSAQ----DLQLQARADTVCDTEPDEDVAAEARRLLDAL 605
           GNLR++ + +++ALA+     V  +    D  +    + V   EP      +A  L   L
Sbjct: 527 GNLRQVSSVMQVALAMAEEQPVRPEHLPDDFFVDLEMEPVDSPEPVAVDLNDAEELNRQL 586

Query: 606 KRHRWRVAHAADELGMSRATAYRHMKRLG 634
           +     ++H A  LG+SR T Y+ +++ G
Sbjct: 587 QAAGGNISHLARRLGVSRNTLYKRLRQSG 615