Pairwise Alignments

Query, 641 a.a., Transcriptional activator of acetoin dehydrogenase operon AcoR from Variovorax sp. SCN45

Subject, 635 a.a., sigma-54-dependent Fis family transcriptional regulator from Pseudomonas fluorescens SBW25-INTG

 Score =  459 bits (1180), Expect = e-133
 Identities = 273/640 (42%), Positives = 375/640 (58%), Gaps = 27/640 (4%)

Query: 6   SRHIDNVYSIATGAALADPTQS-LVHKSWARCVRDHGLDPSKPTPARILPAQEVRAHQQQ 64
           SRH   V ++A G    DP+    + +SW RC+ D+ LDP++     +L    +   +++
Sbjct: 7   SRHAQQVLTVAHGR---DPSSDPSIARSWLRCLEDYHLDPAQTIAPTVLEHGRLLESRER 63

Query: 65  LEHFLRAARAGMEDIYRRVADLGYMVLLTDAEGITVDYIGNPAWDDQLRKAGLYLGADWN 124
           L+  L  A + M  ++++++  G+ VLLTDA G+ ++ +  P+      +AGL+LGADW+
Sbjct: 64  LQQVLHIAGSEMNSLHQQLSGAGHAVLLTDARGVILNCVTAPSERKIFERAGLWLGADWS 123

Query: 125 EAHAGTCGVGTCLVERQPMTCHQTEHFDATHIALTCTTAPLFDHSGKLTAILDVSALRSP 184
           EA  GT G+GTCLVERQ +T H+ EHF   H  LTC+ +P+FD  G L A+LDVS+ R  
Sbjct: 124 EACEGTNGIGTCLVERQSLTIHRDEHFRGRHTGLTCSASPVFDPHGDLLAVLDVSSAREA 183

Query: 185 EAKESQHLVRHLVSMYARMIEDADFLRNFRGHWILRLGSAFGLVDVAGEVMLAFDDGGTL 244
            +++SQ     LV++ A+MIE   FLR+F  HW+LR       V +  E +LAFD  G +
Sbjct: 184 VSRQSQFHTMALVNLSAKMIESCYFLRHFEHHWLLRFHLQAESVGLFSEGLLAFDGNGRI 243

Query: 245 AGANGGARQAFAGHALSGAVSELLHMPMDAIWRIGNG---GAISPLMPFAHTVLLPGGGE 301
              N  A     G    G    LL  P++A +        G  S     +  +    G  
Sbjct: 244 CAVNQSALN-LLGQLRGG----LLGQPVEAFFECSLDQLLGRASANATASWPLRTRDGRP 298

Query: 302 YHASLIAPRSRRAQAPATAAPSARPS-DRLPPLERIAGDDPAMQKLLAQARRLVDRGIHV 360
             A+L      R QA +  AP ARP+    P L  I   DPA+Q+  ++A R+ +R + +
Sbjct: 299 LFAAL------RGQARSVPAPVARPAVVERPRLPGICLGDPALQRDFSKALRVFERDVPL 352

Query: 361 LVEGETGSGKEVLARALHSASSRAAMPFVAVNCAAIPDSLIESELFGYTPGSFTGGRAKG 420
           L+ GETGSGKE  A+A+H AS RA   FVA+NCAAIP+SLIESELFGY  GSFTG R +G
Sbjct: 353 LINGETGSGKEAFAKAVHQASQRADKAFVALNCAAIPESLIESELFGYRGGSFTGARKEG 412

Query: 421 MKGLIAQADRGTLFLDEIGDMPMALQTRLLRVLSEGEVLPLGAESPQRVDIAVVAATHRH 480
           M+G + QAD GTLFLDEIGDMP+ALQTRLLRVL +  V+PLG E PQ V++ +++ATHR+
Sbjct: 413 MQGKLQQADGGTLFLDEIGDMPLALQTRLLRVLEDRLVVPLGGE-PQAVNVRIISATHRN 471

Query: 481 LPGLVASGRFREDLYYRLCGAVLKLPPLRARGDMRYLIEGMFNEEAAAMPSPARLSEEAM 540
           L   V  G FREDLYYRL G  + LP LR R D   L++ +  +EA        L   A 
Sbjct: 472 LLERVQDGSFREDLYYRLNGLEVGLPALRERSDKSQLLDFLLAQEANG--EAVALDPAAR 529

Query: 541 QRLLAHDWPGNLRELRNALRLALALCTGASVSAQDLQL---QARADTVCDTEPDEDVAAE 597
             LLA  WPGN+R+LR  LR  +ALC    V+ +DL     QAR        P E    +
Sbjct: 530 MALLAFAWPGNVRQLRTVLRTLVALCDEGRVALEDLPAQIRQARPVAAAQARPAESPLED 589

Query: 598 ARR--LLDALKRHRWRVAHAADELGMSRATAYRHMKRLGI 635
           A R  LL AL++ RW + H A++LG+SR T YR ++R GI
Sbjct: 590 AERLALLTALQQQRWHMTHTAEQLGVSRNTLYRKLRRHGI 629