Pairwise Alignments

Query, 314 a.a., Alkanesulfonate utilization operon LysR-family regulator Cbl from Variovorax sp. SCN45

Subject, 324 a.a., transcriptional regulator CysB (RefSeq) from Shewanella loihica PV-4

 Score =  277 bits (709), Expect = 2e-79
 Identities = 135/304 (44%), Positives = 198/304 (65%), Gaps = 1/304 (0%)

Query: 1   MNFQQLRSVREAVRCGFNLTEVAHTLHTSQPGVSRQIRELEEELGIELFVRAGKRLTGLT 60
           M  QQLR + E V    N++  A  L+TSQPG+S+Q+R LE+ELGI++F R+GK LT +T
Sbjct: 1   MKLQQLRYIAEVVNHNLNVSATAENLYTSQPGISKQVRMLEDELGIQIFGRSGKHLTHVT 60

Query: 61  EPGGHVLPIIERMLMESSNLKHAGQEFVAQQSGLLSVAATHSQARYAMPVAVQEFRAQFP 120
             G  V+ I   +L +  ++K   +E+     G L++A T +QARYA+P  ++ F  ++P
Sbjct: 61  PAGQQVINIANDILGKVESIKKVAEEYTKPDQGELNIATTDTQARYALPGIIRAFIDRYP 120

Query: 121 NVKLHLHQGSPKQIAQMLLDGEADVGIATEALGDYPQLVALPCYRWTHSVIVPPGHPLLD 180
            V LH+HQG+P QI+++   G+AD  IATE +  Y  L+ LPCY W  S++V   HPL  
Sbjct: 121 KVNLHMHQGTPSQISELAARGDADFAIATEGMHLYTDLIMLPCYHWNRSIVVTKDHPLAS 180

Query: 181 -APLTLDALTRYPLITYDTGFTGRSRIDEAFEQRGLQPNIVLAAMDADVIKTYVQLGLGV 239
              ++++ L R+PL+TY  GF   S I++AF + G+ P +V  A  ADV+KTYV+LGLGV
Sbjct: 181 RTQISIEDLGRFPLVTYVFGFDRESEIEKAFNRAGIDPRVVFTATSADVLKTYVRLGLGV 240

Query: 240 GIVAGVAYEAERDTQLRALDAGRLFGINLTKLAVRRGTYLRKYVYAFIESFAPTLTRAVV 299
           G++A +A +   D  L A+DA  LF  + TK+  R+G +LR Y+Y FIE FAP LT+ +V
Sbjct: 241 GVIASMAVDPVIDKDLVAIDASHLFAHSTTKIGFRKGNFLRNYMYEFIEHFAPHLTKDIV 300

Query: 300 EKAL 303
           EKA+
Sbjct: 301 EKAV 304