Pairwise Alignments

Query, 609 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) / ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 300 a.a., high-affinity branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  184 bits (466), Expect = 6e-51
 Identities = 105/294 (35%), Positives = 168/294 (57%), Gaps = 14/294 (4%)

Query: 6   FFDYTVNGLIIGNIYALLAVGLALIFGVSHLINFAHGSVYTVGAY---IGWASITYLHTP 62
           F    VNGL +G+IY ++A+G  +++G+  +INFAHG ++ +G +   I +  +T     
Sbjct: 4   FVQQLVNGLTLGSIYGMIAIGYTMVYGIIGMINFAHGDIFMLGGFAALIVFLLLTTFIAG 63

Query: 63  LPVTIALVVLGSGALGML--------IERVGLRPLQGAARIAPLLATIGISFVLDILVQL 114
           +PV +AL+++    +GML        IERV  RPL+G+ R+APL+  IG+S VL   +Q+
Sbjct: 64  VPVVLALLIMM--VVGMLTAALWNWTIERVAYRPLRGSFRLAPLITAIGMSIVLSNFIQV 121

Query: 115 VFSPDPRSLPTQLPDWRLRIGTGTIGALDILIAGIGIASAAVLFGFLRFTKLGWAVRATA 174
              P  + +P  +       G  ++    I+I  I     +V +  +  T LG A RAT 
Sbjct: 122 TQGPRNKPIPPLVSSVYDLFGI-SVSLKQIIIVVITAILLSVFWYIVNRTPLGRAQRATE 180

Query: 175 QDRDAAQQMGVDVDRVNQTVFAIAAALGGLSGLLVGMYYNNISPAMSFQATLKGVVATVV 234
           QDR  A  +GVDVDR     F + AAL  ++G +  MYY  +     F   +K   A V+
Sbjct: 181 QDRKMAALLGVDVDRTISVTFIMGAALAAVAGTMYLMYYGVVVFTDGFAPGVKAFTAAVL 240

Query: 235 GGVGNVPGAIVGSLLLGLIESYGVAILGTPYRNLFAFALLLVILVWKPNGLFGR 288
           GG+G++PGA++G LL+GLIES   A     Y+++  F++L ++L++KP+G+ GR
Sbjct: 241 GGIGSLPGAVLGGLLIGLIESLWSAYFTIDYKDVATFSILAIVLIFKPSGILGR 294



 Score = 99.0 bits (245), Expect = 2e-25
 Identities = 85/291 (29%), Positives = 144/291 (49%), Gaps = 22/291 (7%)

Query: 334 LLQTLTNAWLYGALALSLTLVAGTIGQISLGHAGLLAIGAYASSLLVLDLHLPV-GTGIV 392
           L+  LT   +YG +A+  T+V G IG I+  H  +  +G +A+ ++ L L   + G  +V
Sbjct: 8   LVNGLTLGSIYGMIAIGYTMVYGIIGMINFAHGDIFMLGGFAALIVFLLLTTFIAGVPVV 67

Query: 393 LAGILTSLIG--TALIF------PAFR-LRGHYVSIATLGIGEIVALTILNWESLTHGPI 443
           LA ++  ++G  TA ++       A+R LRG +  +A L     +++ + N+  +T GP 
Sbjct: 68  LALLIMMVVGMLTAALWNWTIERVAYRPLRGSF-RLAPLITAIGMSIVLSNFIQVTQGPR 126

Query: 444 GVSGIPPL-----SLFGRDASSNEAIYWASFGAMVLLALLQWRLLRSHLGRTFRAVREDE 498
               IPPL      LFG   S  + I        +LL++  + + R+ LGR  RA  +D 
Sbjct: 127 N-KPIPPLVSSVYDLFGISVSLKQIIIVVI--TAILLSVFWYIVNRTPLGRAQRATEQDR 183

Query: 499 VAARAYGVSPDRYKALAFGFGGFAAGVSGAFTAHMYSYINHETFGSQISILALTMVILGG 558
             A   GV  DR  ++ F  G   A V+G      Y  +   T G    + A T  +LGG
Sbjct: 184 KMAALLGVDVDRTISVTFIMGAALAAVAGTMYLMYYGVVVF-TDGFAPGVKAFTAAVLGG 242

Query: 559 LGNISGALLGAVALVSLPELFRV--TAEYRMLIYGVALLLLIRFRPQGLLG 607
           +G++ GA+LG + +  +  L+    T +Y+ +     L +++ F+P G+LG
Sbjct: 243 IGSLPGAVLGGLLIGLIESLWSAYFTIDYKDVATFSILAIVLIFKPSGILG 293